Pairwise Alignments

Query, 324 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 397 a.a., Prokaryotic membrane lipoprotein lipid attachment site/Cytochrome D1 heme domain protein from Dechlorosoma suillum PS

 Score = 60.1 bits (144), Expect = 9e-14
 Identities = 37/130 (28%), Positives = 63/130 (48%), Gaps = 3/130 (2%)

Query: 14  LSAGSAEANKVFVSNERGNNITVLDSESWEVIATFPAGNRPRGITISPDGKELYV--CAS 71
           L   S    K ++     + + V+D+++W+  A  P  ++P  +   PDG+E++V     
Sbjct: 258 LRGWSVAGGKAYLPAIGRHEVLVVDTKTWKETARIPVKSQPVFVMARPDGREIWVNFAFP 317

Query: 72  DDDTVRVFDPETYKELHTLPSGPDPELFALDPSGNPLYIANEDDNLVTVVDVKTRQVLAE 131
           D+  V+V D    K  HTL  G         P G  ++++  DDN VTV D +T+  +AE
Sbjct: 318 DNGWVQVIDTLEGKVTHTLQPGKAILHMEFAPRGEAVWLSARDDNKVTVFDTRTKAPVAE 377

Query: 132 VPVGVEPEGV 141
           +     P G+
Sbjct: 378 LK-AESPSGI 386



 Score = 50.8 bits (120), Expect = 5e-11
 Identities = 46/182 (25%), Positives = 73/182 (40%), Gaps = 14/182 (7%)

Query: 45  IATFPAGNRPRGITISPDGKELYVCASDDDTVRVFD---PETY---------KELHTLPS 92
           +  + AG +P    ++PDG+        +D + + D   PE           K    LP 
Sbjct: 193 VQKYSAGKQPYDALVTPDGRYYIAGLFGEDGLAMLDTWQPEQGVQKILAGYGKGEQPLPV 252

Query: 93  GPDPELFALDPSGNPLYIANEDDNLVTVVDVKTRQVLAEVPVGVEPEGVAVSPDAKTI-I 151
              P L     +G   Y+     + V VVD KT +  A +PV  +P  V   PD + I +
Sbjct: 253 YKMPHLRGWSVAGGKAYLPAIGRHEVLVVDTKTWKETARIPVKSQPVFVMARPDGREIWV 312

Query: 152 NTSETTN-MAHFIDASTYKIVHNVLVDQRPRYAEFTADGKKLYVSAEIGGTVSVIDVSAA 210
           N +   N     ID    K+ H +   +   + EF   G+ +++SA     V+V D    
Sbjct: 313 NFAFPDNGWVQVIDTLEGKVTHTLQPGKAILHMEFAPRGEAVWLSARDDNKVTVFDTRTK 372

Query: 211 EP 212
            P
Sbjct: 373 AP 374



 Score = 49.3 bits (116), Expect = 2e-10
 Identities = 69/291 (23%), Positives = 116/291 (39%), Gaps = 33/291 (11%)

Query: 50  AGNRPRGITISPDGKELYVCASDDDTVRVFDPETYKELHTLPS----GPDPELFAL-DPS 104
           AGN   G  IS DGK +     +   ++ FD ET + +  +PS    G   ++  L D S
Sbjct: 108 AGNAIGG-AISQDGKLVVAQNYEPGGIKAFDAETLELVADIPSVDMNGVRSKVVGLADLS 166

Query: 105 GNPLYIANEDDNLVTVVDVKTRQV--LAEVPVGVEPEGVAVSPDAK------------TI 150
           GN    +  +   + V D+   +   + +   G +P    V+PD +             +
Sbjct: 167 GNRFAFSLFEAGEIWVADLSNVKAPKVQKYSAGKQPYDALVTPDGRYYIAGLFGEDGLAM 226

Query: 151 INTSETTNMAHFIDASTYKIVHNVLVDQRPRYAEFTADGKKLYVSAEIGGTVSVIDVSAA 210
           ++T +       I A   K    + V + P    ++  G K Y+ A     V V+D    
Sbjct: 227 LDTWQPEQGVQKILAGYGKGEQPLPVYKMPHLRGWSVAGGKAYLPAIGRHEVLVVDTK-- 284

Query: 211 EPKITKKITFEVPGVLPEWLQPVGVKATKDGSRIFV--ALGPANRVAVIDGKTDEVLDYF 268
                   T++    +P   QPV V A  DG  I+V  A      V VID    +V    
Sbjct: 285 --------TWKETARIPVKSQPVFVMARPDGREIWVNFAFPDNGWVQVIDTLEGKVTHTL 336

Query: 269 LVGQRVWQMAFTPGEEFLITTNGNSNDVSIIDVKAEKVIRSVQVGEQPWGV 319
             G+ +  M F P  E +  +  + N V++ D + +  +  ++  E P G+
Sbjct: 337 QPGKAILHMEFAPRGEAVWLSARDDNKVTVFDTRTKAPVAELK-AESPSGI 386



 Score = 34.3 bits (77), Expect = 5e-06
 Identities = 53/238 (22%), Positives = 89/238 (37%), Gaps = 36/238 (15%)

Query: 109 YIANEDDNLVTVVDVKTRQVLAEVPVGVEPEGVAVSPDAKTIINTSETTNMAHFIDASTY 168
           Y+   D  L T VD+    +   +       G A+S D K ++  +         DA T 
Sbjct: 83  YVFGRDGGL-TKVDILNASIAKRIVQAGNAIGGAISQDGKLVVAQNYEPGGIKAFDAETL 141

Query: 169 KIVHNV-LVDQRPRYAEFTA----DGKKLYVSAEIGGTVSVIDVSAAE-PKITKKITFEV 222
           ++V ++  VD     ++        G +   S    G + V D+S  + PK+ K    + 
Sbjct: 142 ELVADIPSVDMNGVRSKVVGLADLSGNRFAFSLFEAGEIWVADLSNVKAPKVQKYSAGK- 200

Query: 223 PGVLPEWLQPVGVKATKDGSRIFVALGPANRVAVID---------------GKTDEVLD- 266
                   QP     T DG      L   + +A++D               GK ++ L  
Sbjct: 201 --------QPYDALVTPDGRYYIAGLFGEDGLAMLDTWQPEQGVQKILAGYGKGEQPLPV 252

Query: 267 YFLVGQRVWQMAFTPGEEFLITTNGNSNDVSIIDVKAEKVIRSVQVGEQPWGVVVAPD 324
           Y +   R W +A   G+ +L       ++V ++D K  K    + V  QP  V+  PD
Sbjct: 253 YKMPHLRGWSVA--GGKAYLPAI--GRHEVLVVDTKTWKETARIPVKSQPVFVMARPD 306