Pairwise Alignments

Query, 747 a.a., sensor histidine kinase from Sinorhizobium meliloti 1021

Subject, 977 a.a., periplasmic sensor hybrid histidine kinase from Synechococcus elongatus PCC 7942

 Score =  137 bits (346), Expect = 2e-36
 Identities = 119/421 (28%), Positives = 203/421 (48%), Gaps = 42/421 (9%)

Query: 339 LEQRVQERTAELTEANRLLQIHADEQTKIEAALRHAKEAAEAAHTSKTRFLAAASHDLLQ 398
           LE RVQERTA L E N  L+               A+E AEAA+ +K+ FLA  SH+L  
Sbjct: 446 LEHRVQERTAALRETNDRLE--------------QAREQAEAANQAKSAFLANMSHELRT 491

Query: 399 PINAAKLYLSMLTDKVGQP-GTEEVV---RRLKRSFTSIESLLQALLDISRLDSSGAEFN 454
           P+NA   Y  M+ ++       EE++   R++  +   +  L+ ++LD+S++++   E  
Sbjct: 492 PLNAIIGYSEMMMEEAEDGIEVEELLPDFRKINNAGKHLLELINSILDLSKIEAGRMELY 551

Query: 455 VTSFNLGNLLQGVAEDLAPLATERGIDLRI-VPSS-RWVSSDQRYLMRCVQNLVVNAIQY 512
           + SF+L  L+ GV   + PL  +    L +  P+    +++D   L + + NL+ NA ++
Sbjct: 552 LESFSLPELINGVKSIIKPLIEKNQNQLLVDCPADIGLMTADVTKLRQTLLNLLSNASKF 611

Query: 513 TERGRVLVGCRLTGDAVRIEVWDTGVGISEEDRTRIFKEFTRA--SGAAKGPGMGLGLSI 570
           T +G + +     GD V  +V D+G+G+S E   RIF+ F +A  S   K  G GLGLSI
Sbjct: 612 THQGTIQLQVAAQGDQVVFKVVDSGIGMSPEQIDRIFEAFAQADDSTTRKFGGTGLGLSI 671

Query: 571 VERACRHLDHPIRLASQPGRGSVFSIEVPLAAPGHASVSEDPRMEPML-----------D 619
                  +   I + S  G GS F+I +P       S+   P ++P+L           +
Sbjct: 672 SRHFIEMMGGKITVESVLGEGSTFTITLPRQVQPPQSI---PAVDPVLTDEAIATATEQE 728

Query: 620 GSLDLIVMIVENDADELHAMTQVLESWGASVLAADSTADAAALMQEIGTAPDILLVDYQL 679
                +V++V+++      + ++LE  G  V+ A   A+     QE+   P ++ +D  +
Sbjct: 729 DQNQPVVLVVDDEPSARELLRRMLEKEGYRVVTAAGGAEGLQRAQEL--RPALITLDLMM 786

Query: 680 DDEDNGIETIHTLRA-LAGAEIPAIIISANRQRQFLQLCNEMSFAVLTKPVQLVRLRALI 738
              D G   +  L+A    AEIP +++S    R          +  L KP+   +LR ++
Sbjct: 787 PQVD-GWSVLTALKADPMLAEIPVVMVSMVEGRSLSYALGAADY--LHKPIDRDQLRRIL 843

Query: 739 D 739
           +
Sbjct: 844 E 844



 Score = 37.7 bits (86), Expect = 3e-06
 Identities = 25/96 (26%), Positives = 48/96 (50%), Gaps = 6/96 (6%)

Query: 625 IVMIVENDADELHAMTQVLESWGASVLAADSTADAAALMQEIGTAPDILLVDYQLDDEDN 684
           + +++E+D      + Q+LE  G  V  A+      A+++ +   PD++L+D  +   D 
Sbjct: 854 LALVIEDDPVNRSLLRQLLERDGWQVAEANQGQQGLAVLESLEQPPDLILLDLMMPQMD- 912

Query: 685 GIETIHTLRALAGAE-IPAIIISA----NRQRQFLQ 715
           G   +  LRA    + +P I+++A     + RQ LQ
Sbjct: 913 GFAFVDALRANGNWQTLPVIVVTAKDLTEQDRQRLQ 948