Pairwise Alignments

Query, 747 a.a., sensor histidine kinase from Sinorhizobium meliloti 1021

Subject, 1281 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score =  145 bits (367), Expect = 1e-38
 Identities = 140/565 (24%), Positives = 257/565 (45%), Gaps = 62/565 (10%)

Query: 205  RREKNRLIDQQSHLLQAAFDHMSLGICTFSSGGELLVRNERFGELLGVPLSLLKKGSPFQ 264
            R+E+ R +  +  + +A F+H   G+   +  G +   N     +LG             
Sbjct: 660  RKEQARAMASEVSMRRALFEHSRDGLVLLTEDGAVAEANPAMAAMLGYT----------- 708

Query: 265  RIVEHVERHEILDREGR--RSRVAGWFKAVRRG-EAVQERFRRRDGMSLDIRIHSL---- 317
               E +ER  + D +    R ++    +A+ +G E  Q   R +DG + ++ + +     
Sbjct: 709  --PEEMERLHVWDWDAAIPREQITAMLRALSKGGEFFQTVHRHKDGRTFNVEVSASRVEW 766

Query: 318  PDDGFIVSI-MDVTAETQASALLEQRVQERTAELTEANRLLQIHADEQTKIEAALRHAKE 376
                +++ +  D+T   +    LEQ +++    L E      +HA         L  A++
Sbjct: 767  EGQAYVLCLHRDITFRLR----LEQELEQHRHHLEEL-----VHARTME-----LAEARD 812

Query: 377  AAEAAHTSKTRFLAAASHDLLQPINAAKLYLSMLTDKVGQPGTEEVVRRLKRSFTSIESL 436
             AE+A  +K+ FLA  SH++  P+NA      +L  +VG     E V ++  + T + ++
Sbjct: 813  EAESASRAKSAFLANMSHEIRTPMNAILGLSHLLGREVGDARARERVDKIHGAATHLLNI 872

Query: 437  LQALLDISRLDSSGAEFNVTSFNLGNLLQGVAEDLAP------LATERGIDLRIVPSSRW 490
            +  +LD+S++++     ++  F L  L       L P      L  ER +D  + P  R 
Sbjct: 873  INDILDLSKIEAEKLHLDMQDFLLARLFDNAENLLRPQLEAKGLRLERHLDPALPPVLR- 931

Query: 491  VSSDQRYLMRCVQNLVVNAIQYTERGRVLVGCRLTGDA-----VRIEVWDTGVGISEEDR 545
               D  +L + + N + NA++++++G + +G RL   +     +R+EV D G+GI+ E +
Sbjct: 932  --GDAMHLQQILVNFLSNAVKFSDQGHITLGARLLSRSQSQVELRLEVADQGIGIAPEQQ 989

Query: 546  TRIFKEFTRA--SGAAKGPGMGLGLSIVERACRHLDHPIRLASQPGRGSVFSIEVPLAAP 603
              +F+ F +A  S   K  G GLGL+I +R  R +   I + S+PG+GSVF I + L   
Sbjct: 990  AALFQAFEQADNSTTRKYGGTGLGLAISKRLIRLMGGDIGVDSKPGQGSVFWISLRLEVA 1049

Query: 604  GHASVSEDPRMEPMLDGSL-----DLIVMIVENDADELHAMTQVLESWGASVLAADSTAD 658
              A+ +     E  L   L        +++ E++A        +L   G +V  A+    
Sbjct: 1050 DTAAGTTAATAEQELPARLRARHGGCRILLAEDNALNQEVAQDLLHDAGLAVSVAEDGHQ 1109

Query: 659  AAALMQEIGTAPDILLVDYQLDDEDNGIETIHTLRALAG-AEIPAIIISANRQRQFLQLC 717
            A +L Q  G   D++L+D  +   D G++    +R L G A++P + ++A    +    C
Sbjct: 1110 AVSLAQSGGF--DLVLMDVNMPHLD-GLQATRAIRELPGCADLPILAMTAGAFAEDRARC 1166

Query: 718  NE--MSFAVLTKPVQLVRLRALIDW 740
             E  M+  V    V  V  +AL+ W
Sbjct: 1167 LEAGMNDFVAKPVVPEVLYQALLRW 1191