Pairwise Alignments

Query, 747 a.a., sensor histidine kinase from Sinorhizobium meliloti 1021

Subject, 1306 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score =  128 bits (321), Expect = 2e-33
 Identities = 113/394 (28%), Positives = 187/394 (47%), Gaps = 36/394 (9%)

Query: 359 IHADEQTKIEAALRHAKEAAEAAHTSKTRFLAAASHDLLQPINA--AKLYLSMLTDKVGQ 416
           +   E+  +E  LR A+  AE A  +K+ FLA  SH++  P+NA     +L+M T+    
Sbjct: 553 VDISERKLMEEELRRARATAEEATEAKSLFLANMSHEIRTPMNAIIGMAHLAMKTELT-- 610

Query: 417 PGTEEVVRRLKRSFTSIESLLQALLDISRLDSSGAEFNVTSFNLGNLLQGVAEDLAPLAT 476
           P   + V ++  +  S+  ++  +LD S++++         F+L ++L  V+  L   A 
Sbjct: 611 PKQRDYVGKIHNAAISLLGIINDILDFSKIEAGKLSLEYVPFSLEDVLDNVSGLLGLKAN 670

Query: 477 ERGIDLRI---VPSSRWVSSDQRYLMRCVQNLVVNAIQYTERGRVLVGCR---LTGDAVR 530
           E+G++L       +   +  D   L + + NLV NAI++TERG++ +  R     GD V+
Sbjct: 671 EKGLELLFNVNAGTPAGLVGDPLRLNQILTNLVSNAIKFTERGQITLTTRPVDQAGDRVK 730

Query: 531 IEVW--DTGVGISEEDRTRIFKEFTRASGAA--KGPGMGLGLSIVERACRHLDHPIRLAS 586
           ++ W  D G+G+S E    +F+ FT+A G+   K  G GLGLSI  R    +   I   S
Sbjct: 731 LQFWIEDMGIGMSREQLLHLFQAFTQADGSTTRKYGGTGLGLSISRRLVEMMGGTIWADS 790

Query: 587 QPGRGSVFSIEVPLAAPGHASVSEDPRMEPMLDGSLDLIVMIVENDADELHAMTQVLESW 646
             G GS F      A  G A     PR  P       L V++ +++      + + L   
Sbjct: 791 TLGEGSTFCF---TAWFGRAEELARPRTLPA--SLAGLRVLVADDNGAAREILGEALRHL 845

Query: 647 GASVLAADSTADAAALMQEIGTAPD---ILLVDYQLDDEDNGIETIHTL-RALAGAEIPA 702
                   S A+A A + E+    D   +L +D+Q+ D D G+ T+H L +AL  A+ P 
Sbjct: 846 DLRPDLVASGAEALAQLTEMQGGADPYRVLFLDWQMPDLD-GVSTLHKLQQALPQAQWPR 904

Query: 703 III-------SANRQRQFLQLCNEMSFAVLTKPV 729
           +++          RQ + L +C      +L KPV
Sbjct: 905 VVMVTAYDQEELRRQTENLGIC-----GILVKPV 933



 Score = 28.5 bits (62), Expect = 0.002
 Identities = 37/136 (27%), Positives = 52/136 (38%), Gaps = 42/136 (30%)

Query: 218 LLQAAFDHMSLGICTFSSGGELLVRNERFGELLGVPLSLLKKGSPFQRIVEHVERHEILD 277
           LL A    ++LG+      G  +V   R    + VPL +L   S         ER   LD
Sbjct: 340 LLLAVLAVLALGL------GLGVVMAARLARRVAVPLDILAGDS---------ERIGALD 384

Query: 278 REGRRSRVAGWFKAVRRGEAVQERFRRRDGMSLDIRIHSLPDDGFIVSIMDVTAETQASA 337
              R+ R  GW + + R  A QE  R                     ++ D T       
Sbjct: 385 FSPRQYRRTGW-REIDRLAAAQEHMRE--------------------TLQDATLR----- 418

Query: 338 LLEQRVQERTAELTEA 353
            LE+RV++RT EL +A
Sbjct: 419 -LEERVEQRTRELADA 433