Pairwise Alignments
Query, 747 a.a., sensor histidine kinase from Sinorhizobium meliloti 1021
Subject, 1145 a.a., sensor histidine kinase/response regulator (NCBI ptt file) from Shewanella oneidensis MR-1
Score = 277 bits (708), Expect = 3e-78 Identities = 178/535 (33%), Positives = 274/535 (51%), Gaps = 34/535 (6%) Query: 218 LLQAAFDHMSLGICTFSSGGELLVRNERFGELLGVPLSLLKKGSPFQRIVEHVERHEILD 277 +L+ A +H G+ S L+ N ++ EL P L++G P ++ Sbjct: 624 MLRGAIEHAYEGMSVIDSDLNLVAWNYKYVELYQYPEGFLQQGMPISEVIRFNAARGYCG 683 Query: 278 REGRRSRVAGWFKAVRRGEAVQERFRRRDGMSLDIRIHSLPDDGFIVSIMDVT------- 330 +V + +R G +R+DG + I+ + +PD GF+++ D+T Sbjct: 684 SGAIEQQVEKRVQHMRNGTPHTSERQRKDGKVIKIQGNPMPDGGFVMTFTDITQYRQQER 743 Query: 331 AETQASALLEQRVQERTAELTEANRLLQIHADEQTKIEAALRHAKEAAEAAHTSKTRFLA 390 A +A+ LE RV+ERT EL N + L AK E A+ SK+RFLA Sbjct: 744 ALLEANETLESRVKERTFELAMLN--------------SELLEAKAQEEMANASKSRFLA 789 Query: 391 AASHDLLQPINAAKLYLSMLTDKVGQPGTEEVVR----RLKRSFTSIESLLQALLDISRL 446 A HDL+QP+NAA+L+ + L+ P + R + S + LL LLDIS+L Sbjct: 790 AVGHDLMQPLNAARLFTASLSQ---YPNLDREARTTLSHVNSSLKTAGELLTDLLDISKL 846 Query: 447 DSSGAEFNVTSFNLGNLLQGVAEDLAPLATERGIDLRIVPSSRWVSSDQRYLMRCVQNLV 506 DS + N F + LL G++ + +A + I +++P S V+SD L R +QN + Sbjct: 847 DSGMVDVNRRDFAISELLNGLSVEFEAMAADNQIRFKMIPCSATVNSDPSLLRRVLQNFL 906 Query: 507 VNAIQYTERGRVLVGCRLTGDAVRIEVWDTGVGISEEDRTRIFKEFTRASG--AAKGPGM 564 NA +Y GRVL GCR G + I+V DTG GI E + IFKEF R + + G+ Sbjct: 907 TNAYRYARGGRVLFGCRHRGSELEIQVLDTGCGIDEHETHEIFKEFKRLNNPRSKSVSGL 966 Query: 565 GLGLSIVERACRHLDHPIRLASQPGRGSVFSIEVPLA-APGHASVSEDPRMEPMLDGSLD 623 GLGL+I +R R L+H I+++SQ GRGSVFSI VPL V P + L G Sbjct: 967 GLGLAIADRISRVLNHGIQVSSQLGRGSVFSITVPLGETVRQPQVKALPSLLQPLSG--- 1023 Query: 624 LIVMIVENDADELHAMTQVLESWGASVLAADSTADAAALMQEIGTAPDILLVDYQLDDED 683 + V+ ++N+ L + +L W V+ A ADA + G APDI+L D+ LDD Sbjct: 1024 IKVLCIDNEEAILAGLESLLSRWQCEVICAKDLADARIKLGLKGVAPDIVLADFHLDDGQ 1083 Query: 684 NGIETIHTLRALAGAEIPAIIISANRQRQFLQLCNEMSFAVLTKPVQLVRLRALI 738 NG++ + +R+L G ++P I+I+AN +++ ++ + + K ++ LRALI Sbjct: 1084 NGVDAMDGIRSLYGKDLPGILITANTRKELVEDVQRRGYHYMAKMIKPAALRALI 1138