Pairwise Alignments

Query, 747 a.a., sensor histidine kinase from Sinorhizobium meliloti 1021

Subject, 1145 a.a., sensor histidine kinase/response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  277 bits (708), Expect = 3e-78
 Identities = 178/535 (33%), Positives = 274/535 (51%), Gaps = 34/535 (6%)

Query: 218  LLQAAFDHMSLGICTFSSGGELLVRNERFGELLGVPLSLLKKGSPFQRIVEHVERHEILD 277
            +L+ A +H   G+    S   L+  N ++ EL   P   L++G P   ++          
Sbjct: 624  MLRGAIEHAYEGMSVIDSDLNLVAWNYKYVELYQYPEGFLQQGMPISEVIRFNAARGYCG 683

Query: 278  REGRRSRVAGWFKAVRRGEAVQERFRRRDGMSLDIRIHSLPDDGFIVSIMDVT------- 330
                  +V    + +R G       +R+DG  + I+ + +PD GF+++  D+T       
Sbjct: 684  SGAIEQQVEKRVQHMRNGTPHTSERQRKDGKVIKIQGNPMPDGGFVMTFTDITQYRQQER 743

Query: 331  AETQASALLEQRVQERTAELTEANRLLQIHADEQTKIEAALRHAKEAAEAAHTSKTRFLA 390
            A  +A+  LE RV+ERT EL   N              + L  AK   E A+ SK+RFLA
Sbjct: 744  ALLEANETLESRVKERTFELAMLN--------------SELLEAKAQEEMANASKSRFLA 789

Query: 391  AASHDLLQPINAAKLYLSMLTDKVGQPGTEEVVR----RLKRSFTSIESLLQALLDISRL 446
            A  HDL+QP+NAA+L+ + L+     P  +   R     +  S  +   LL  LLDIS+L
Sbjct: 790  AVGHDLMQPLNAARLFTASLSQ---YPNLDREARTTLSHVNSSLKTAGELLTDLLDISKL 846

Query: 447  DSSGAEFNVTSFNLGNLLQGVAEDLAPLATERGIDLRIVPSSRWVSSDQRYLMRCVQNLV 506
            DS   + N   F +  LL G++ +   +A +  I  +++P S  V+SD   L R +QN +
Sbjct: 847  DSGMVDVNRRDFAISELLNGLSVEFEAMAADNQIRFKMIPCSATVNSDPSLLRRVLQNFL 906

Query: 507  VNAIQYTERGRVLVGCRLTGDAVRIEVWDTGVGISEEDRTRIFKEFTRASG--AAKGPGM 564
             NA +Y   GRVL GCR  G  + I+V DTG GI E +   IFKEF R +   +    G+
Sbjct: 907  TNAYRYARGGRVLFGCRHRGSELEIQVLDTGCGIDEHETHEIFKEFKRLNNPRSKSVSGL 966

Query: 565  GLGLSIVERACRHLDHPIRLASQPGRGSVFSIEVPLA-APGHASVSEDPRMEPMLDGSLD 623
            GLGL+I +R  R L+H I+++SQ GRGSVFSI VPL        V   P +   L G   
Sbjct: 967  GLGLAIADRISRVLNHGIQVSSQLGRGSVFSITVPLGETVRQPQVKALPSLLQPLSG--- 1023

Query: 624  LIVMIVENDADELHAMTQVLESWGASVLAADSTADAAALMQEIGTAPDILLVDYQLDDED 683
            + V+ ++N+   L  +  +L  W   V+ A   ADA   +   G APDI+L D+ LDD  
Sbjct: 1024 IKVLCIDNEEAILAGLESLLSRWQCEVICAKDLADARIKLGLKGVAPDIVLADFHLDDGQ 1083

Query: 684  NGIETIHTLRALAGAEIPAIIISANRQRQFLQLCNEMSFAVLTKPVQLVRLRALI 738
            NG++ +  +R+L G ++P I+I+AN +++ ++      +  + K ++   LRALI
Sbjct: 1084 NGVDAMDGIRSLYGKDLPGILITANTRKELVEDVQRRGYHYMAKMIKPAALRALI 1138