Pairwise Alignments

Query, 229 a.a., transcriptional regulator from Sinorhizobium meliloti 1021

Subject, 209 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  158 bits (399), Expect = 9e-44
 Identities = 81/212 (38%), Positives = 128/212 (60%), Gaps = 6/212 (2%)

Query: 12  SIKSALVIDDHPLYCDALAATMESTFNTRRIRTATSLSEALQQLRMRFSPDLIMLDLNLP 71
           S  + ++ DDHPL+ +AL  ++    +   +  A SL   L  L     PDL++LDL +P
Sbjct: 3   STYTIIIADDHPLFRNALFQSVHMAISGANLLEADSLDALLTLLNKESEPDLLLLDLKMP 62

Query: 72  DASGLSGFLKIKEKMPDIPVIVISAFTSKDVVQSVIAAGAAGFIPKDIDRHNFQEAMQDI 131
            A+G+SG + ++ + PD+P++VISA     VV  V + GA GFIPK  D  +   A+  +
Sbjct: 63  GANGMSGLIHLRSEYPDLPIVVISASEEPSVVSQVKSHGAFGFIPKSSDMRSLIAALNQV 122

Query: 132 WNGKTYVPPGYAVPARATATDQSVETISRKIAHLSQQQTRILSLICEGMPNKLIAYEMQL 191
            NG+ Y P    V             ++ K+A L+ QQ ++L ++ +G+ NK IAYE+ +
Sbjct: 123 LNGEPYFPAHLLVDGFVG------NDLAEKVAALTPQQYKVLGMLSDGLLNKQIAYELNV 176

Query: 192 AEATVKAHITALLRRLGVHNRTQAAMLVREVS 223
           +EAT+KAH+TA+ R+LGV NRTQA +L++E+S
Sbjct: 177 SEATIKAHMTAIFRKLGVKNRTQAVILLKEMS 208