Pairwise Alignments

Query, 616 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 574 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

 Score =  162 bits (409), Expect = 5e-44
 Identities = 145/531 (27%), Positives = 242/531 (45%), Gaps = 43/531 (8%)

Query: 89  RALFSPVSADLFWRPLFNTLSVAVGAISLSLLVGTVLAWLISRTDMFGRRWFATALIVPY 148
           R L +  +   FW    NTL   + +  L+++VG  LA ++  T +  R       ++P 
Sbjct: 58  RVLGARATTTAFW----NTLEAGLASTLLAVVVGGGLAIVVGLTTVRARGLLTFICLIPL 113

Query: 149 MLPAWTFALAWTTLF-KNRTVGGQPGWLEATGLTPPDWLAYGQFPITIILALHYTPFVIL 207
           ++PA   ALAW  L   N  +    G   ATG   P + A G   +  +L L + P V L
Sbjct: 114 LIPAQIAALAWLELAGPNSPLLRLIGLGVATGQRNPLYSAGG---VIWLLGLEHAPMVFL 170

Query: 208 LFGSALRRFDSQLEDSARILGAKRHQVALQIILPLMRPALLSSMVLIFAKCLGEFGVPYV 267
              + LR   + L ++AR+ GA+  ++ L I+LPL+RPALL+   L F   +G FGV  +
Sbjct: 171 AARAGLRALPNDLVEAARMAGARGPRIVLTIVLPLLRPALLAGAALAFVSAIGNFGVSAL 230

Query: 268 LGLPVKFEVLSTSLFRSIASRQTGVAGVIAGSIMLIG-------IITLWIDARLVREARR 320
           LG+P +F +L+T ++R +      V   +A   M++        ++  W   R  R A R
Sbjct: 231 LGIPGRFPMLTTLIYRRLNGFGPDVLAEVAVLAMILAGLAGAGLLLQAWAWGRQNRHAAR 290

Query: 321 FVTIGSKGSMNRQSRLGRMRLPAAGFAATVFLLSVGLPLLTLL-LSTVMKMPARFTLDNF 379
                   +      LGR RL   G       L+  +PL  L   +    +    T D+ 
Sbjct: 291 ------DTAALAPLPLGRWRLLVEGGLWLFLGLTALMPLAALTGAALAPALGVATTWDSA 344

Query: 380 TLDYWIGRDLDTIALKTGILLSSDLWTAARNTLTIVGIASVTSGILGLLVGYVVI--RTP 437
           TLD++     + + L+           A  N+ T+  +A     ++   + Y ++  R P
Sbjct: 345 TLDHFRAVFANPVMLR-----------ALTNSFTLATVAGGVGLVVAAPLAYFIVTRRAP 393

Query: 438 VRLLSVYLRQVTFLPYLVPGIAFAAAYLSLFAVPRGPLP-ALYGTVVILVLALIADQMPY 496
              L+  L  +  +PY +PGI  + + + L+  P   L   LY +  IL++A +   +  
Sbjct: 394 ---LARALNYIADMPYALPGIILSISCILLYLKPLPGLGIGLYNSFWILLVAYLGRFLAL 450

Query: 497 ASRAGISAMTQLGKDPEEAAQVAGAGWLRRMISIVIPIQKGSLVTGVLLPFISGIKGLSL 556
           + R  ++ + Q+    EEAA+VAGAG + R  +IV+P+   +   G LL F++    L++
Sbjct: 451 SLRPAMAGVAQIDPALEEAARVAGAGPMARFFAIVLPLAAPAAAAGGLLVFLAAFNELTV 510

Query: 557 FVILAVPSTDVLTTYSLRLVDYHYTQAANAV----VLIIAAIAYCGTLIAQ 603
             +L     + L      L D   + AA AV    VL   A+A   T+ A+
Sbjct: 511 SALLWSAGHETLGVMVFSLTDEGNSNAAAAVSVIAVLATLAVALAATVFAR 561