Pairwise Alignments

Query, 616 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 293 a.a., putrescine transport system permease protein PotH from Phaeobacter inhibens DSM 17395

 Score = 79.3 bits (194), Expect = 2e-19
 Identities = 63/216 (29%), Positives = 104/216 (48%), Gaps = 11/216 (5%)

Query: 98  DLFWRPLFNTLSVAVGAISLSLLVGTVLAWLISRTDMFGRRWFATALIVPYMLPAWTFAL 157
           DL+W+   ++L +AV +  L+LLVG  +A+ ++R       W  T +++  +LP WT  L
Sbjct: 69  DLYWKAYLSSLRIAVVSTVLTLLVGYPMAYGMARAPS---EWRPTLMML-VILPFWTSFL 124

Query: 158 ----AWTTLFKNRTVGGQPGWLEATGLTP-PDWLAYGQFPITIILALHYTPFVILLFGSA 212
               AW  +  N  +  Q  +L   GL   P  +      + I +   Y PF+IL   SA
Sbjct: 125 IRVYAWMGILSNEGLLNQ--FLIWAGLIDTPLTILNTNTAVYIGIVYTYLPFMILPIYSA 182

Query: 213 LRRFDSQLEDSARILGAKRHQVALQIILPLMRPALLSSMVLIFAKCLGEFGVPYVLGLPV 272
           L R D  L ++A  LG  R +    + +PL R  +++   L+F   LGEF +P +LG   
Sbjct: 183 LERLDGSLIEAAEDLGCSRMEAFWLVTIPLSRAGIIAGCFLVFIPTLGEFVIPSLLGGSD 242

Query: 273 KFEVLSTSLFRSIASRQTGVAGVIAGSIMLIGIITL 308
              +         ++R   VA  +A  ++LI I+ +
Sbjct: 243 TLMIGKVLWEEFFSNRDWPVASAVAVVLLLILIVPI 278



 Score = 36.6 bits (83), Expect = 1e-06
 Identities = 39/163 (23%), Positives = 70/163 (42%), Gaps = 14/163 (8%)

Query: 399 LLSSDL-WTAARNTLTIVGIASVTSGILGLLVGYVVIRTP------VRLLSVYLRQVTFL 451
           L   DL W A  ++L I  +++V + ++G  + Y + R P      + +L +     +FL
Sbjct: 65  LTEDDLYWKAYLSSLRIAVVSTVLTLLVGYPMAYGMARAPSEWRPTLMMLVILPFWTSFL 124

Query: 452 --PYLVPGIAFAAAYLSLFAVPRG----PLPALYGTVVILVLALIADQMPYASRAGISAM 505
              Y   GI      L+ F +  G    PL  L  T   + + ++   +P+      SA+
Sbjct: 125 IRVYAWMGILSNEGLLNQFLIWAGLIDTPLTIL-NTNTAVYIGIVYTYLPFMILPIYSAL 183

Query: 506 TQLGKDPEEAAQVAGAGWLRRMISIVIPIQKGSLVTGVLLPFI 548
            +L     EAA+  G   +     + IP+ +  ++ G  L FI
Sbjct: 184 ERLDGSLIEAAEDLGCSRMEAFWLVTIPLSRAGIIAGCFLVFI 226