Pairwise Alignments

Query, 616 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 544 a.a., iron(III) ABC transporter, permease protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 97.4 bits (241), Expect = 1e-24
 Identities = 130/574 (22%), Positives = 233/574 (40%), Gaps = 78/574 (13%)

Query: 44  LTALLFTYLIVVPIISIVLDAVRVQ---FGHERRLSKDVGDLTLNYLDRALFSPVSADLF 100
           LT      L+V+P+++++L A +     FGH                   L S V     
Sbjct: 11  LTGYAIAVLLVLPLLALLLQAAQPDEAVFGH-------------------LLSTVLPTYI 51

Query: 101 WRPLFNTLSVAVGAISLSLLVGTVLAWLISRTDMFGRRWFATALIVPYMLPAWTFALAWT 160
              L+  L V++G    SLL+    AWL++R +  GRR+   AL++P  +PA+  A  +T
Sbjct: 52  ANSLWLILWVSIG----SLLLALPCAWLMARCEFVGRRYLQWALLLPLAMPAYIVAYVYT 107

Query: 161 TLFK-----NRTVGGQPGWLEATGLTPPDWLAYGQFPITIILALHYTPFVILLFGSALRR 215
            L        R++    GW        PD    G      +L+L   P++ LL  +A   
Sbjct: 108 DLLDYAGPVQRSLRALFGWSSPQDYFFPDIRTLG--GAACVLSLVLFPYIYLLARTAFME 165

Query: 216 FDSQLEDSARILGAKRHQVALQIILPLMRPALLSSMVLIFAKCLGEFGVPYVLGLPVKFE 275
               L  ++RI+G    Q   ++ LP+ RPAL   + L+  +   +F       +P    
Sbjct: 166 QSLNLAHASRIMGCSPWQSFWRLSLPMARPALAVGVALVAMETAADFATVNYFAVP---- 221

Query: 276 VLSTSLFRSIASRQTGVAGVIAGSIMLIGIITLWIDARLVREARRFVTIGSKGSMNRQSR 335
            L+T+++ +        A     +I+L+ + +L    R  R  ++           +QSR
Sbjct: 222 TLTTAVYDTWLGYGNLTAAAKLSAIILLVVFSLIGVERFARRKQQL--------FQKQSR 273

Query: 336 LGRMRLPAAGFAATVFLLSVGLPLLTLLLSTVMKMPARFTLDNFTLDYWIGRDLDTIALK 395
           +  + L       T  LL +G   + LLL+ V  +P+   L ++ ++Y+  +  D +   
Sbjct: 274 IQAIDLYRLSPMQT--LLGLGYCGMLLLLAFV--LPSGILL-SYAINYF-EQSWDPL--- 324

Query: 396 TGILLSSDLWTAARNTLTIVGIASVTSGILGLLVGYVVIRTPVRLLSVYLRQVTFLPYLV 455
                    W  + N+LT+  I S+   ++ L++ + + R   R       ++    Y +
Sbjct: 325 --------FWQLSVNSLTLALITSLVCCVIALVLMF-IRRVSPRSSDALPSRLASTGYAL 375

Query: 456 PGIAFAAAYLSL-----FAV--------PRGPLPALYGTVVILVLALIADQMPYASRAGI 502
           PG   A   L       FA+          GP   L G+ V LV A     +  A  +  
Sbjct: 376 PGTVLAIGVLVPLTLLDFAINDIADWLGMAGPGLLLTGSTVALVFAFCVRFVAIAIGSVE 435

Query: 503 SAMTQLGKDPEEAAQVAGAGWLRRMISIVIPIQKGSLVTGVLLPFISGIKGLSLFVILAV 562
           S+  ++    +  +   G    R +  + +P+    L  G LL FI  +K L   ++L  
Sbjct: 436 SSYKRISPSLDMVSLTLGQSPRRLLQRVHLPLLTKGLFAGALLVFIESMKELPAALLLRP 495

Query: 563 PSTDVLTTYSLRLVDYHYTQ--AANAVVLIIAAI 594
              + L TY  + V     +  A  A+V+++  +
Sbjct: 496 IGFENLATYVFQFVSDEKLEHGALPAIVIVLVGL 529