Pairwise Alignments

Query, 501 a.a., ABC transporter oligopeptide-binding protein from Sinorhizobium meliloti 1021

Subject, 533 a.a., Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2) from Pseudomonas fluorescens FW300-N2E2

 Score =  133 bits (335), Expect = 1e-35
 Identities = 130/508 (25%), Positives = 223/508 (43%), Gaps = 61/508 (12%)

Query: 3   MKRTLIMGALM---LGSALAPAFAASGPVKIVL---PEEADLLEPCMATRSNIGRIIMQN 56
           M+ TL++ AL+   L +A + A AA G +       P   D  +   AT ++    +   
Sbjct: 1   MRHTLVLSALLGTGLLAATSAAQAAGGSLVFCSEGSPAGFDTAQYTTATDNDAAEPLYNR 60

Query: 57  VSETLTELDVREGKGLMPRLAESWEQKEDG-SWRFNLRTGVKF------SDGTDFNAKDV 109
           ++E       +    ++P LA  W+  EDG  + F+LR GVKF      +   DFNA DV
Sbjct: 61  LAEF-----EKGATNVVPGLATRWDISEDGLKYTFHLREGVKFHTTDYFTPTRDFNADDV 115

Query: 110 KYSFDRVMSDKNACESRR-----YFGGMNI-----KIDVVDDTTVDFTVDPVQP--ILPL 157
            ++F+R++  ++           YF GM++     K++     TV  T++ V    I  +
Sbjct: 116 LFTFNRMLDPQHPFRKAYPTEFPYFNGMSLNKNIAKVEATGPLTVVMTLNSVDAAFIQNI 175

Query: 158 LLSLLTIVPEE---------TPMEFVREPVGTGPYKLTDWTPGQQIVLSARDDYWG-EKP 207
            +S   I+  E          P +  ++P+GTGP++   +     I   A   YW  E+ 
Sbjct: 176 AMSFAAILSAEYADQLLKNGKPSDINQKPIGTGPFEFKSYQKDSNIRYVANQQYWAPERV 235

Query: 208 EVTEATYLFRADPAVRAAMVQTGEAD--LSPSISQTEATNPATDFSYLDSETV---YLRI 262
           ++    +    D +VR   ++  E    L P  +   A         ++       Y+  
Sbjct: 236 KLNNLIFSINTDASVRVQKLKANECQVTLHPRPADVPALKNDPKLQLIEKPGFNLGYIAY 295

Query: 263 DHNIEPLNDVRIRRALNLAIDREAFLGTLVPDSAVLATAIVPPPTLGWNPDVKVFPYDPE 322
           +   +P + V +R+AL++A++++  L  +   +  LA   +PP    ++  +K  PY+PE
Sbjct: 296 NTRHKPFDQVEVRQALDMAVNKQGILNAVYQGAGQLAQNAMPPTQWSYDDTIKDAPYNPE 355

Query: 323 QAKKLIEEAKADGVKVDTPITI----IARTANFPNVTEIMEAIQAQLQEVGLKVELKFVE 378
           +AK+L+   KA GVK  T IT+    + R  N PN   + E +QA   ++GLKV++   E
Sbjct: 356 KAKELL---KAAGVKEGTEITLWAMPVQRPYN-PNAKLMAEMLQADWAKIGLKVKIVSYE 411

Query: 379 VAEHEVYYSKPFKEG-RGPQLVAAMHDNSKGDPSFSMFFKYDSEG--TQSGFSDPKVDDL 435
             E    Y K  K G     L+    DN   D      +  D+ G    S + D   D L
Sbjct: 412 WGE----YIKRTKNGEHDVSLIGWTGDNGDPDNWLGTLYSCDAIGGNNYSMWCDQDYDKL 467

Query: 436 IARASAAVG-DERAKLWSEVIAYVHDEV 462
           I +A      D+R  L+ +    +  +V
Sbjct: 468 IKQAKVVTDRDQRTVLYKQAQQLLKQQV 495