Pairwise Alignments

Query, 501 a.a., ABC transporter oligopeptide-binding protein from Sinorhizobium meliloti 1021

Subject, 541 a.a., Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2) from Pseudomonas fluorescens FW300-N2E2

 Score =  126 bits (317), Expect = 2e-33
 Identities = 134/514 (26%), Positives = 224/514 (43%), Gaps = 65/514 (12%)

Query: 3   MKRTLIMGALMLGSALAPAFAASGPVKIVLPEEADL--LEPCMATRSNIGRIIMQNVSET 60
           M +  ++  L+  S LA A  A     +V   E      +P   T         + +   
Sbjct: 1   MLKQAVIPFLVGASLLASAPFAQAATNLVFCSEGSPAGFDPGQYTTGTDFDASAETMFNR 60

Query: 61  LTELDVREGKGLMPRLAESWEQKEDG-SWRFNLRTGVKF------SDGTDFNAKDVKYSF 113
           LT+ + R G  ++P LA  W+  +DG ++ F+LR GVKF          +FNA DV ++F
Sbjct: 61  LTQFE-RGGTAVIPGLATKWDISDDGLTYTFHLREGVKFHTTPYFKPTREFNADDVLFTF 119

Query: 114 DRVMSDKNACESRR-----YFGGMNI-----KIDVVDDTTVDFTVDPVQP--ILPLLLSL 161
           +R++S  +           YF  M +     +ID VDD TV FT+  V    I  + +S 
Sbjct: 120 NRMISKDDPFRKAYPTEFPYFTDMGMDTNITQIDKVDDHTVKFTLKDVDAAFIQNMAMSF 179

Query: 162 LTIVPEETPMEFVRE---------PVGTGPYKLTDWTPGQQIVLSARDDYWGEKPE---V 209
            +I   E   + ++E         PVGTGP+    +     I  +   DYW  KP+   +
Sbjct: 180 ASIQSAEYAAQLLKEGKAPDINQKPVGTGPFVFKSYQKDSNIRYTGNKDYW--KPDDVKI 237

Query: 210 TEATYLFRADPAVRAAMVQTGEADLS--PSISQTEATNPATDFSYLDSETVYL------- 260
               +    DP+VR   ++  E  ++  P  +  +A          D     L       
Sbjct: 238 DNLIFAITTDPSVRMQKLKKNECQITLFPRPADLKALKEDKTLKMPDQAGFNLGYIAYNV 297

Query: 261 --RIDHNIEP--LNDVRIRRALNLAIDREAFLGTLVPDSAVLATAIVPPPTLGWNPDVKV 316
             +I  + EP  L ++++R+AL++A+++   + ++   +  LA   +PP    ++  +K 
Sbjct: 298 MDKIKGSNEPNVLANLKVRQALDMAVNKPQIIDSVYQGAGQLAVNAMPPTQWSYDTTIKD 357

Query: 317 FPYDPEQAKKLIEEAKADGVKVDTPITI----IARTANFPNVTEIMEAIQAQLQEVGLKV 372
             YDPE+AK+L++EA   GVK  T IT+    + R  N PN   + E +Q+  +++GL V
Sbjct: 358 AKYDPEKAKELLKEA---GVKEGTNITLWAMPVQRPYN-PNAKLMAEMLQSDWKKIGLNV 413

Query: 373 ELKFVEVAEHEVYYSKPFKEGRGPQLVAAMH-DNSKGDPSFSMFFKYDS--EGTQSGFSD 429
            +   E  E    Y K  K G    ++     DN   D   ++ F  DS      S + D
Sbjct: 414 NIVSYEWGE----YIKRSKGGENQAMIIGWSGDNGDPDNWLNVLFGCDSLAGNNFSKWCD 469

Query: 430 PKVDDLIARASAAVGD-ERAKLWSEVIAYVHDEV 462
            K D L+  A       +R +L+ +    + D V
Sbjct: 470 KKFDGLVKEAKRTTDQAKRTELYKQAQHVLKDAV 503