Pairwise Alignments

Query, 501 a.a., ABC transporter oligopeptide-binding protein from Sinorhizobium meliloti 1021

Subject, 533 a.a., Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2) from Pseudomonas fluorescens FW300-N2E2

 Score =  121 bits (304), Expect = 5e-32
 Identities = 124/483 (25%), Positives = 204/483 (42%), Gaps = 52/483 (10%)

Query: 3   MKRTLIMGALMLGSALAPAFAASGPVKIVLPEEADL--LEPCMATRSNIGRIIMQNVSET 60
           M RT     L+  + ++ A  A     +V   EA     +P   T         + V   
Sbjct: 1   MDRTTFKPLLLTLALISSAPMAQAATTLVYCSEASPAGFDPSQYTSGTDFDASAETVFNR 60

Query: 61  LTELDVREGKGLMPRLAESWEQKEDGS-WRFNLRTGVKF------SDGTDFNAKDVKYSF 113
           LT+   R G  + P LA  W+   DG  + F+LR GVKF      S   DFNA DV ++F
Sbjct: 61  LTQFK-RGGTEVEPGLATRWDVSADGLVYTFHLREGVKFHTTDYFSPSRDFNADDVLFTF 119

Query: 114 DRVMSDKNACESRR-----YFGGMNIK-----IDVVDDTTVDFTVDPVQP--ILPLLLSL 161
            R++  ++           YF  M +      ++ VD+ TV F ++ V    +  L +S 
Sbjct: 120 QRLLDPQHPFRQAYPTESPYFTDMGLNTTIKSVEKVDEHTVRFNLNNVDAAFVQNLAMSF 179

Query: 162 LTIVPEETPMEFVRE---------PVGTGPYKLTDWTPGQQIVLSARDDYWGEKPE---V 209
            ++   E   + ++E         P+GTGP+    +    QI  +    YW  KPE   +
Sbjct: 180 ASVQSAEYAAQLLKEGKAGDLNQKPIGTGPFVFKRYQKDSQIRYAGNTAYW--KPEDVKL 237

Query: 210 TEATYLFRADPAVRAAMVQTGEADLS--PSISQTEATNPATDFSYLDSETVYLR-IDHNI 266
               +    D AVR   ++ GE  +S  P  +  E      +   L      L  + +N+
Sbjct: 238 DNLIFSITPDAAVRLQKLKRGECQVSGYPRPADIEVMEQDPNLQVLKQPGFNLGFLAYNV 297

Query: 267 E--PLNDVRIRRALNLAIDREAFLGTLVPDSAVLATAIVPPPTLGWNPDVKVFPYDPEQA 324
              PL+ +++R+AL++AID+ A +  +   +  LA   +PP    ++P++K  P+D  +A
Sbjct: 298 THPPLDQLKVRQALDMAIDKPAIIKAVYQSAGQLAQNALPPAQWSFDPNIKDAPHDVTKA 357

Query: 325 KKLIEEA-KADGVKVDTPITIIARTANFPNVTEIMEAIQAQLQEVGLKVELKFVEVAEHE 383
           K L++EA  A G  +D     + R +N PN     + IQ    ++G+K  +   E  E  
Sbjct: 358 KALLKEAGVAPGTTIDLWAMTVQRASN-PNARMSAQMIQQDWAKIGIKANIVSYEWGE-- 414

Query: 384 VYYSKPFKEGRGPQLVAAMHDNSKGDPSFSMFFKYDSEGTQSG----FSDPKVDDLIARA 439
             Y K  K G    ++        GDP   +   Y     +      + DP  D LI +A
Sbjct: 415 --YIKRAKNGEHDAMIYGW-TGDNGDPDNWLGVLYSCAAVKGSNYAKWCDPAYDQLIQQA 471

Query: 440 SAA 442
             +
Sbjct: 472 KVS 474