Pairwise Alignments

Query, 304 a.a., oligopeptide ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 314 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

 Score =  175 bits (444), Expect = 1e-48
 Identities = 98/311 (31%), Positives = 164/311 (52%), Gaps = 12/311 (3%)

Query: 1   MLRFIRQRALASLISLIGLIVMVFFLSRM-TGDPAALFL-------PVEASAEMKEQFRE 52
           M+ F+ +R    +  L+G  +++F + R+   DPA  +L        V+A AE +++   
Sbjct: 1   MVSFVLKRLALLVPMLLGASLVIFLMLRLGPSDPAMDYLRLSRIPPTVQALAETRQRL-- 58

Query: 53  LHGLNDPILVQFARYVGDVVTGDLGESLRKARPALDVVLEAFTWTLWLAVITMTLVTGAA 112
             GL+ P+ VQ+  ++   +  D G S    RP L  +L     TL LA + + L  G +
Sbjct: 59  --GLDQPLAVQYWVWLNKALHLDFGVSYATGRPVLPDLLHYLPATLHLAGVALALTLGLS 116

Query: 113 IVVGSLGAFRSGGFFDRLSSMVSLIGASVPDFWLAIVAIVIFSINFAILPTSGTGSVVHW 172
           I +G   A R     D++   V+ +G S+P+FWL  + +++FS+    LP  G G   H 
Sbjct: 117 IPLGMWAARRRDALPDQIVRGVAFLGVSMPNFWLGFLLVLVFSVELGWLPAMGRGGAEHM 176

Query: 173 ILPIAVLFVRPFGIIVQVVRGSMVSALSSAYVKTARAKGVKSGPIIFIHALRNAMLPVIT 232
           I+P   +      I  +++R SM+      +V  AR +G+ +  +   H LRNA+LP+IT
Sbjct: 177 IMPAVAIAFMSLSINARLLRASMLEVSGQRHVYYARLRGLSAAKVERAHILRNALLPIIT 236

Query: 233 VVGDQAASLLNGAVVVETIFGFPGVGKLMIDSILQRDFNVVLAAILVTAIAIFLMNVLID 292
             G     L+ G +V+E+IFG+PGVG+  + +I  RD+ V+    L+  +   L N+++D
Sbjct: 237 ATGMHVGELIGGTLVIESIFGWPGVGRFAVSAIFNRDYPVIQCFTLLMVLIFVLCNLIVD 296

Query: 293 LAYALLDPRIR 303
           + YA  DPRIR
Sbjct: 297 IVYAWADPRIR 307