Pairwise Alignments

Query, 304 a.a., oligopeptide ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 326 a.a., ABC transporter permease from Rhodopseudomonas palustris CGA009

 Score =  178 bits (451), Expect = 2e-49
 Identities = 103/308 (33%), Positives = 172/308 (55%), Gaps = 23/308 (7%)

Query: 16  LIGLIVMVFFLSRMT-GDPAALFLPVE--ASAEMKEQFRELHGLNDPILVQFARYVGDVV 72
           L+ ++VM F L  +  GDP  +       AS E+    R  +GL+  +L Q   Y+G V 
Sbjct: 18  LLAVLVMNFCLIHLAPGDPVQVIAGEMGGASPEVIAALRAKYGLDHSLLEQMFTYLGKVA 77

Query: 73  TGDLGESLRKARPALDVVLEAFTWTLWLAVITMTLVTGAAIVVGSLGAFRSGGFFDRLSS 132
            GD G S    +P L ++L+    TL+LA  ++ +      V+G + A R  G      +
Sbjct: 78  HGDFGYSYYFNQPVLGLILQRLPATLYLAAASLVVAVLIGTVLGVISARRPNGLLSHGVT 137

Query: 133 MVSLIGASVPDFWLAIVAIVIFSINFAILPTSGTGSVV--------------HWILP--- 175
           +++L G + P FW  ++ +++F   + ILP +G   VV              H +LP   
Sbjct: 138 VLALAGHAAPIFWTGLLLLLLFGSVWPILPVNGMTDVVNPKTGFAYAADVAKHLVLPSIT 197

Query: 176 IAVLFVRPFGIIVQVVRGSMVSALSSAYVKTARAKGVKSGPIIFIHALRNAMLPVITVVG 235
           + ++FV  +  + +V   +M+  LS+ Y++TARAKG+    ++  HALRN ++P++TVVG
Sbjct: 198 LGLVFVAQYSRLARV---NMIDVLSADYIRTARAKGLPERVVLVKHALRNTLIPIVTVVG 254

Query: 236 DQAASLLNGAVVVETIFGFPGVGKLMIDSILQRDFNVVLAAILVTAIAIFLMNVLIDLAY 295
            Q  +L  GAV+VET++ +PG+G+L+ DSIL+RD+  ++  +  +A+ +   N+L DL Y
Sbjct: 255 LQFGNLFAGAVLVETVYSWPGMGRLVFDSILRRDYPTLMGVLFFSAVMVIAANILTDLVY 314

Query: 296 ALLDPRIR 303
            L+DPRIR
Sbjct: 315 RLIDPRIR 322