Pairwise Alignments

Query, 304 a.a., oligopeptide ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 326 a.a., putative peptide ABC transporter, permease protein from Phaeobacter inhibens DSM 17395

 Score =  180 bits (456), Expect = 5e-50
 Identities = 106/319 (33%), Positives = 175/319 (54%), Gaps = 16/319 (5%)

Query: 1   MLRFIRQRALASLISLIGLIVMVFFLSRMTGDPAALFLPVEASAEMKEQFRELHGLNDPI 60
           ML +I +R + S++ L  + ++ F + R  GDP    L  E + E   + R   GL+ P 
Sbjct: 1   MLAYIIRRIMQSVLVLFVVGLVAFSMFRFVGDPIENMLGQERTTEDVVRLRADLGLDQPF 60

Query: 61  LVQFARYVGDVVTGDLGESLRKARPALDVVLEAFTWTLWLAVITMTLVTGAAIVVGSLGA 120
            VQ+ R++ +   G+ G S R+ RP  D+++E    TL LA+++ TL     I +G L A
Sbjct: 61  PVQYWRFLENAAQGNFGLSYRQGRPVADILIERAPATLELALVSGTLAMVLGIGLGVLTA 120

Query: 121 FRSGGFFDRLSSMVSLIGASVPDFWLAIVAIVIFSINFAILPTSGTGSVV---HW----- 172
            R  G+        SLIG S+P F + I+ I +FS+    LP+ G G  V    W     
Sbjct: 121 IRRDGWLANTIMTASLIGVSLPTFLIGILLIYVFSVELGWLPSFGRGETVMLGQWSTGFL 180

Query: 173 --------ILPIAVLFVRPFGIIVQVVRGSMVSALSSAYVKTARAKGVKSGPIIFIHALR 224
                   +LP   L +    +I+++VR  M+  L + Y++ ARA+G+    + F HAL 
Sbjct: 181 TKSGLMSLVLPSITLGLYQMTLIMRLVRSEMLEVLRTDYIRFARARGLGERAVYFRHALV 240

Query: 225 NAMLPVITVVGDQAASLLNGAVVVETIFGFPGVGKLMIDSILQRDFNVVLAAILVTAIAI 284
           N M+PVIT++G Q  S++  A++ ET+F +PGVG L I+++   D  V+ A +++ ++  
Sbjct: 241 NTMVPVITIIGLQLGSIIAFAIITETVFQWPGVGLLFINAVQFVDIPVMAAYLMLISVLF 300

Query: 285 FLMNVLIDLAYALLDPRIR 303
             +N+++DL Y L+DPR+R
Sbjct: 301 VGINLIVDLLYFLIDPRLR 319