Pairwise Alignments

Query, 304 a.a., oligopeptide ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 326 a.a., dipeptide transport system permease protein DppB from Phaeobacter inhibens DSM 17395

 Score =  183 bits (465), Expect = 4e-51
 Identities = 100/319 (31%), Positives = 173/319 (54%), Gaps = 17/319 (5%)

Query: 1   MLRFIRQRALASLISLIGLIVMVFFLSRMTGDPAALFLPVEASAEMKEQFRELHGLNDPI 60
           ML ++ +R   ++  +  + ++ F +    GDP    +    S E+++Q R+  GLND  
Sbjct: 1   MLAYLVKRVFQAIAVMFAISLIGFAIQDNLGDPLRELVGQSVSEEVRQQLRDELGLNDSF 60

Query: 61  LVQFARYVGDVVTGDLGESLRKARPALDVVLEAFTWTLWLAVITMTLVTGAAIVVGSLGA 120
           + Q+ R++G+ + GDLG S     PALDV+L+    TL L +    ++ G ++ +G   A
Sbjct: 61  VTQYVRFLGNALQGDLGTSYFFKEPALDVILKKLPATLELVMGATLIIVGLSVPLGVYTA 120

Query: 121 FRSGGFFDRLSSMVSLIGASVPDFWLAIVAIVIFSINFAILPTSGTGSVVH--------- 171
            +      RL   +S++G SVP F  AI+ I +FS+     P+ G G VVH         
Sbjct: 121 IKPNTILSRLIMGISIVGISVPVFLTAILMIFVFSVELGWFPSYGRGDVVHVFGYWDTNF 180

Query: 172 -----WI---LPIAVLFVRPFGIIVQVVRGSMVSALSSAYVKTARAKGVKSGPIIFIHAL 223
                W+   LP   L      + V+++R  M+  L S YVK ARAKG++   I FIHAL
Sbjct: 181 ATADGWVHILLPSVALASIMLPLFVRLIRAEMMEVLQSEYVKYARAKGIRPYRIYFIHAL 240

Query: 224 RNAMLPVITVVGDQAASLLNGAVVVETIFGFPGVGKLMIDSILQRDFNVVLAAILVTAIA 283
           +N +LPVITV G Q  +++   ++ ET+F +PG+G + ++++ + D  +++A +++    
Sbjct: 241 KNTLLPVITVGGVQIGTMVAYTILTETVFQWPGMGFMFLEAVNRVDTPLIVAYLIIVGFI 300

Query: 284 IFLMNVLIDLAYALLDPRI 302
             + N ++DL Y L++P +
Sbjct: 301 FVVTNTIVDLIYGLVNPTV 319