Pairwise Alignments

Query, 304 a.a., oligopeptide ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 339 a.a., dipeptide ABC transporter permease DppB from Pantoea sp. MT58

 Score =  215 bits (547), Expect = 1e-60
 Identities = 124/337 (36%), Positives = 187/337 (55%), Gaps = 33/337 (9%)

Query: 1   MLRFIRQRALASLISLIGLIVMVF-FLSRMTGDPAALFLPVEA-SAEMKEQFRELHGLND 58
           ML+FI +R    + + IG+ ++ F F+  + GDP  +       S E   Q   L GL+ 
Sbjct: 1   MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVLIMAGERGISPERHAQLMALLGLDQ 60

Query: 59  PILVQFARYVGDVVTGDLGESLRKARPALDVVLEAFTWTLWLAVITMTLVTGAAIVVGSL 118
           P+  Q+  Y+  V+ GDLG SL+   P  D  +  F  TL L +  M       I VG L
Sbjct: 61  PLWKQYLHYINGVLHGDLGISLKSRIPVWDEFVPRFKATLELGICAMIFAVAIGIPVGVL 120

Query: 119 GAFRSGGFFDRLSSMVSLIGASVPDFWLAIVAIVIFSINFAILPTSG------------- 165
            A + G  FD  +  +SL G S+P FW  I+ I++ S+ F + P SG             
Sbjct: 121 AAVKRGSIFDHTAVGISLTGYSMPIFWWGIMLIMLVSVQFNLTPVSGRVGDTVFLDDSMP 180

Query: 166 -TG-----------------SVVHWILPIAVLFVRPFGIIVQVVRGSMVSALSSAYVKTA 207
            TG                 +V+H ILP  VL   P  +IV++ R +M+  L   Y++TA
Sbjct: 181 LTGFMLIDTFFWGEPGDFHDAVMHMILPAIVLGTIPLAVIVRMTRSAMLEVLGEDYIRTA 240

Query: 208 RAKGVKSGPIIFIHALRNAMLPVITVVGDQAASLLNGAVVVETIFGFPGVGKLMIDSILQ 267
           RAKG+    +I +HALRNAMLPV+TV+G Q  +LL GA++ ETIF +PG+G+ +I+++ +
Sbjct: 241 RAKGLTRMRVIVVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIEALQR 300

Query: 268 RDFNVVLAAILVTAIAIFLMNVLIDLAYALLDPRIRH 304
           RD+ VV   +L+TA+ I ++N+L+DL Y +++PRIRH
Sbjct: 301 RDYPVVQGGVLLTAVLIIVVNLLVDLLYGVVNPRIRH 337