Pairwise Alignments

Query, 304 a.a., oligopeptide ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 339 a.a., dipeptide ABC transporter permease DppB from Klebsiella michiganensis M5al

 Score =  204 bits (519), Expect = 2e-57
 Identities = 122/337 (36%), Positives = 183/337 (54%), Gaps = 33/337 (9%)

Query: 1   MLRFIRQRALASLISLIGLIVMVF-FLSRMTGDPAALFLPVEA-SAEMKEQFRELHGLND 58
           ML+FI +R    + + IG+ ++ F F+  + GDP  +       S E   Q     GL+ 
Sbjct: 1   MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAEMGLDK 60

Query: 59  PILVQFARYVGDVVTGDLGESLRKARPALDVVLEAFTWTLWLAVITMTLVTGAAIVVGSL 118
           P+  Q+  Y+  V+ GDLG SL+   P  +  +  F  T+ L V  M       I VG L
Sbjct: 61  PMWQQYVNYIWGVMHGDLGISLKSRIPVWEEFVPRFKATMELGVCAMIFAIIVGIPVGVL 120

Query: 119 GAFRSGGFFDRLSSMVSLIGASVPDFWLAIVAIVIFSINFAILPTSG------------- 165
            A + G  FD  S  ++L G S+P FW  ++ I++ S+   + P SG             
Sbjct: 121 AAVKRGSIFDHTSVGLALTGYSMPIFWWGMMLIMLVSVQLNLTPVSGRISDTVFLDDTLP 180

Query: 166 -TG-----------------SVVHWILPIAVLFVRPFGIIVQVVRGSMVSALSSAYVKTA 207
            TG                 +V+H ILP  VL   P  +IV++ R SM+  L   Y++TA
Sbjct: 181 LTGFMLIDTAIWGEPGDFIDAVMHMILPAVVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240

Query: 208 RAKGVKSGPIIFIHALRNAMLPVITVVGDQAASLLNGAVVVETIFGFPGVGKLMIDSILQ 267
           RAKG+    +I +HALRNAMLPV+TV+G Q  +LL GA++ ETIF +PG+G+ +ID++ +
Sbjct: 241 RAKGLTRMRVIVVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300

Query: 268 RDFNVVLAAILVTAIAIFLMNVLIDLAYALLDPRIRH 304
           RD+ VV   +L+ A  I L+N+L+DL Y +++PRIRH
Sbjct: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRH 337