Pairwise Alignments

Query, 548 a.a., oligopeptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 526 a.a., microcin ABC transporter ATP-binding protein from Pseudomonas fluorescens FW300-N2E3

 Score =  432 bits (1111), Expect = e-125
 Identities = 245/532 (46%), Positives = 350/532 (65%), Gaps = 24/532 (4%)

Query: 1   MAEHLLEVRNLSVEFHTAAGVVHAVKSISYHLDKGETLAILGESGSGKSVSSSAIMNLID 60
           M+++L+E+R+L+V F   A    AV+++   +  GE LA++GESGSGKSV++ +I+ L+ 
Sbjct: 1   MSDNLIEIRDLNVAFSGQA----AVRNVCLDIRPGECLALVGESGSGKSVTAQSILQLLP 56

Query: 61  MPPGRISSGEILLDGRDLLTMPAEERREVNGRRVAMIFQDPLSHLNPVYSVGWQISEAMT 120
              G  + G I   G++L+       R + G R+AMIFQ+P++ LNP++SV  QI E + 
Sbjct: 57  -DGGTETRGSIRYRGQELIGADVATLRALRGNRIAMIFQEPMTSLNPLHSVEKQIGETLL 115

Query: 121 TH-GLAGSKAREEALRLLRRVGIPEPERAMRKYPHEFSGGQRQRVMIAMALALRPDLLIA 179
            H GL    A++  L LL  VGI +PE  ++ YPH+ SGGQRQRVMIAMALA  P+LLIA
Sbjct: 116 VHKGLGDKAAQKRTLELLELVGIKKPEERLKAYPHQLSGGQRQRVMIAMALACEPELLIA 175

Query: 180 DEPTTALDVTVQAEVLKLLKELQRETGMAVLIITHDLGVVSEIADRVVVMEKGAIVEAGT 239
           DEPTTALDVTVQ ++L+LLK LQ+  GM++L+I+HDL +V  IA RV VM  G IVE   
Sbjct: 176 DEPTTALDVTVQRKILRLLKSLQQRLGMSLLLISHDLNLVRSIAQRVCVMHAGEIVEQAE 235

Query: 240 VREIYKNPQHPYTQKLIAAAPGKGAMHEPGARAEPLLSVRDV------------RKTYGS 287
              ++ +PQHPY++ L+ A P    +  P    E +L V D+            RKT+  
Sbjct: 236 CERLFNHPQHPYSRLLLNAEPEGEPL--PRDEREVVLEVNDLNVRFPLGGGLFQRKTW-- 291

Query: 288 FEALKGISFDLMPGETMAVVGESGSGKSTLARALLRLDEPDSGTALWKGRDLFALSPAEL 347
             A+ GIS  +  G+T+ +VGESGSGKSTL +A+LRL + D G+  ++G  L +L+  +L
Sbjct: 292 LHAVDGISLSIQRGKTLGIVGESGSGKSTLGQAILRLLDSD-GSIRFQGEALDSLNQKQL 350

Query: 348 YKLRRDLQMVFQDPTQSLNPRMTVYQLISEAWVIHPDILPKAKWRERVAELLVQVGLSAE 407
              R+ +Q+VFQDP  SL+PRM+V Q+ISE   +H      A+   +V ++L +VGL  +
Sbjct: 351 RPWRKQMQVVFQDPFGSLSPRMSVAQIISEGLEVHSQ-SSAAECETQVIQVLKEVGLDPQ 409

Query: 408 HMSRYPHQFSGGQRQRIAIARALALEPQLIICDEAVSALDVSVQAQVIELLDRLRREMGI 467
              RYPH+FSGGQRQRIAIARAL L+P LI+ DE  SALD +VQ QV+ LL +L+ + G+
Sbjct: 410 SRHRYPHEFSGGQRQRIAIARALVLKPALILLDEPTSALDRTVQKQVVALLRQLQEKYGL 469

Query: 468 AFIFIAHDLPVVRDFADYVMVMQQGEVVELGTVREVFDTPRQAYTRALLAAS 519
            ++FI+HDL V+R  A  ++V++ G+VVE G   +VF  P+  YT+ LLAA+
Sbjct: 470 TYLFISHDLAVIRALAHDMIVIKDGKVVERGASHDVFAAPQHPYTKELLAAA 521



 Score =  187 bits (476), Expect = 7e-52
 Identities = 106/261 (40%), Positives = 161/261 (61%), Gaps = 10/261 (3%)

Query: 272 AEPLLSVRDVRKTYGSFEALKGISFDLMPGETMAVVGESGSGKSTLARALLRLDEPDSGT 331
           ++ L+ +RD+   +    A++ +  D+ PGE +A+VGESGSGKS  A+++L+L  PD GT
Sbjct: 2   SDNLIEIRDLNVAFSGQAAVRNVCLDIRPGECLALVGESGSGKSVTAQSILQL-LPDGGT 60

Query: 332 AL-----WKGRDLFALSPAELYKLRRD-LQMVFQDPTQSLNPRMTVYQLISEAWVIHPDI 385
                  ++G++L     A L  LR + + M+FQ+P  SLNP  +V + I E  ++H  +
Sbjct: 61  ETRGSIRYRGQELIGADVATLRALRGNRIAMIFQEPMTSLNPLHSVEKQIGETLLVHKGL 120

Query: 386 LPKAKWRERVAELLVQVGLSA--EHMSRYPHQFSGGQRQRIAIARALALEPQLIICDEAV 443
             KA  ++R  ELL  VG+    E +  YPHQ SGGQRQR+ IA ALA EP+L+I DE  
Sbjct: 121 GDKAA-QKRTLELLELVGIKKPEERLKAYPHQLSGGQRQRVMIAMALACEPELLIADEPT 179

Query: 444 SALDVSVQAQVIELLDRLRREMGIAFIFIAHDLPVVRDFADYVMVMQQGEVVELGTVREV 503
           +ALDV+VQ +++ LL  L++ +G++ + I+HDL +VR  A  V VM  GE+VE      +
Sbjct: 180 TALDVTVQRKILRLLKSLQQRLGMSLLLISHDLNLVRSIAQRVCVMHAGEIVEQAECERL 239

Query: 504 FDTPRQAYTRALLAASLSPDP 524
           F+ P+  Y+R LL A    +P
Sbjct: 240 FNHPQHPYSRLLLNAEPEGEP 260