Pairwise Alignments

Query, 548 a.a., oligopeptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 553 a.a., ABC-type uncharacterized transport system, duplicated ATPase component from Pseudomonas stutzeri RCH2

 Score =  483 bits (1242), Expect = e-140
 Identities = 263/532 (49%), Positives = 366/532 (68%), Gaps = 18/532 (3%)

Query: 1   MAEHLLEVRNLSVEFHTAAGVVHAVKSISYHLDKGETLAILGESGSGKSVSSSAIMNLID 60
           +AE+L+EVR+L+VEF T   V   V+ +++ + KGETLA++GESGSGKSV++ +I+ L+ 
Sbjct: 6   IAENLVEVRDLAVEFVTGEQVQRVVEGVTFDIRKGETLALVGESGSGKSVTAHSILRLLP 65

Query: 61  MPPGRISSGEILLDGRDLLTMPAEERREVNGRRVAMIFQDPLSHLNPVYSVGWQISEAMT 120
            P  R   G+IL  G+DLL    +  R++ G R+AM+FQ+P++ LNP+++VG QI+E + 
Sbjct: 66  YPLARHPQGQILFHGQDLLKADEKAMRKIRGNRIAMVFQEPMTSLNPLHTVGKQINEVLE 125

Query: 121 TH-GLAGSKAREEALRLLRRVGIPEPERAMRKYPHEFSGGQRQRVMIAMALALRPDLLIA 179
            H GL G  A    L LL  VGIPEP + +R YPHE SGGQRQRV+IAMALA  P+LLIA
Sbjct: 126 IHKGLRGKAATARTLELLELVGIPEPRKRIRAYPHELSGGQRQRVVIAMALANEPELLIA 185

Query: 180 DEPTTALDVTVQAEVLKLLKELQRETGMAVLIITHDLGVVSEIADRVVVMEKGAIVEAGT 239
           DEPTTALDVTVQ ++L+LLKELQ   GMA+L+I+HDL +V  IA RV VM++G +VE   
Sbjct: 186 DEPTTALDVTVQLKILELLKELQARLGMALLLISHDLNLVRRIAHRVCVMQRGRVVEQAL 245

Query: 240 VREIYKNPQHPYTQKLIAAAPGKGAMHEPGARAEPLLSVRD-----------VRKTYGSF 288
             ++++ PQHPYTQ+L+AA P  G +      A PLL V D           +R+T    
Sbjct: 246 CEDLFRAPQHPYTQELLAAEPSGGPV--AVEEAPPLLEVDDLRVWFPIKKGLLRRTVDHI 303

Query: 289 EALKGISFDLMPGETMAVVGESGSGKSTLARALLRLDEPDSGTALWKGRDLFALSPAELY 348
           +A+ G++F L  G+T+ +VGESGSGKSTL  A+LRL     G   ++G+ L ++S  ++ 
Sbjct: 304 KAVDGVNFSLPKGQTLGIVGESGSGKSTLGLAILRL-LGSRGEIRFQGQHLQSMSQRQVR 362

Query: 349 KLRRDLQMVFQDPTQSLNPRMTVYQLISEAWVIHPDILPKAKWRER-VAELLVQVGLSAE 407
            LRR +Q+VFQDP  SL+PRM+V Q++ E   IH   +  AK +E+ + E LV+VGL  E
Sbjct: 363 PLRRQMQVVFQDPFGSLSPRMSVGQIVGEGLHIHR--MGNAKEQEQAIIEALVEVGLDPE 420

Query: 408 HMSRYPHQFSGGQRQRIAIARALALEPQLIICDEAVSALDVSVQAQVIELLDRLRREMGI 467
              RYPH+FSGGQRQRIAIARAL L+P LI+ DE  SALD +VQ QV+ELL  L+ +  +
Sbjct: 421 TRHRYPHEFSGGQRQRIAIARALVLKPALILLDEPTSALDRTVQRQVVELLRSLQAKYNL 480

Query: 468 AFIFIAHDLPVVRDFADYVMVMQQGEVVELGTVREVFDTPRQAYTRALLAAS 519
            ++FI+HDL VVR  +  +MV++QG+VVE G   ++F  P+  YT+ LL ++
Sbjct: 481 TYLFISHDLAVVRALSHQMMVVKQGQVVEQGAAADIFAAPQHPYTQQLLESA 532



 Score =  188 bits (477), Expect = 5e-52
 Identities = 116/267 (43%), Positives = 162/267 (60%), Gaps = 13/267 (4%)

Query: 272 AEPLLSVRDVRKTYGSFE----ALKGISFDLMPGETMAVVGESGSGKSTLARALLRL--- 324
           AE L+ VRD+   + + E     ++G++FD+  GET+A+VGESGSGKS  A ++LRL   
Sbjct: 7   AENLVEVRDLAVEFVTGEQVQRVVEGVTFDIRKGETLALVGESGSGKSVTAHSILRLLPY 66

Query: 325 --DEPDSGTALWKGRDLFALSPAELYKLRRD-LQMVFQDPTQSLNPRMTVYQLISEAWVI 381
                  G  L+ G+DL       + K+R + + MVFQ+P  SLNP  TV + I+E   I
Sbjct: 67  PLARHPQGQILFHGQDLLKADEKAMRKIRGNRIAMVFQEPMTSLNPLHTVGKQINEVLEI 126

Query: 382 HPDILPKAKWRERVAELLVQVGLSA--EHMSRYPHQFSGGQRQRIAIARALALEPQLIIC 439
           H  +  KA    R  ELL  VG+    + +  YPH+ SGGQRQR+ IA ALA EP+L+I 
Sbjct: 127 HKGLRGKAA-TARTLELLELVGIPEPRKRIRAYPHELSGGQRQRVVIAMALANEPELLIA 185

Query: 440 DEAVSALDVSVQAQVIELLDRLRREMGIAFIFIAHDLPVVRDFADYVMVMQQGEVVELGT 499
           DE  +ALDV+VQ +++ELL  L+  +G+A + I+HDL +VR  A  V VMQ+G VVE   
Sbjct: 186 DEPTTALDVTVQLKILELLKELQARLGMALLLISHDLNLVRRIAHRVCVMQRGRVVEQAL 245

Query: 500 VREVFDTPRQAYTRALLAASLSPDPDA 526
             ++F  P+  YT+ LLAA  S  P A
Sbjct: 246 CEDLFRAPQHPYTQELLAAEPSGGPVA 272