Pairwise Alignments

Query, 548 a.a., oligopeptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 553 a.a., ABC transporter component (NCBI) from Rhodospirillum rubrum S1H

 Score =  482 bits (1240), Expect = e-140
 Identities = 266/534 (49%), Positives = 348/534 (65%), Gaps = 15/534 (2%)

Query: 5   LLEVRNLSVEFHTAAGVVHAVKSISYHLDKGETLAILGESGSGKSVSSSAIMNLIDMPPG 64
           LL V NL V F      V AV+ +S+ + KGETLA++GESGSGKSV++ +I  L+  PP 
Sbjct: 17  LLSVENLQVRFGAGPEAVDAVRGVSFTIAKGETLALVGESGSGKSVTALSITRLLPYPPA 76

Query: 65  RISSGEILLDGRDLLTMPAEERREVNGRRVAMIFQDPLSHLNPVYSVGWQISEAMTTH-G 123
               G I  D  DLL  P    R+V G R++MIFQ+P++ LNP++S+  Q+ E +T H G
Sbjct: 77  SHPGGAIFFDSEDLLHAPGARLRDVRGNRISMIFQEPMTSLNPLHSIERQVGEVLTLHKG 136

Query: 124 LAGSKAREEALRLLRRVGIPEPERAMRKYPHEFSGGQRQRVMIAMALALRPDLLIADEPT 183
           L G   R   + LLR VG+P+ E  +   PHE SGGQRQRVMIAMALA  PDLLIADEPT
Sbjct: 137 LHGKARRARVIDLLRLVGLPQVEGRLGALPHELSGGQRQRVMIAMALANEPDLLIADEPT 196

Query: 184 TALDVTVQAEVLKLLKELQRETGMAVLIITHDLGVVSEIADRVVVMEKGAIVEAGTVREI 243
           TALDVT+QA++L LL +LQ+  GMA+L ITHDL +V  +ADRV VM+ G IVE GT   +
Sbjct: 197 TALDVTIQAQILALLADLQKRFGMAILFITHDLSIVRRVADRVAVMKDGLIVETGTTAAL 256

Query: 244 YKNPQHPYTQKLIAAAPGKGAMHEPGARAEPLLSVRD-----------VRKTYGSFEALK 292
           +  P HPYT+ L+A+ P       P A    +LS  D           +R+T G  +A+ 
Sbjct: 257 FAAPSHPYTKALLASEPRGTPRLVPNA--PEILSCDDLKVWFPIRKGVIRRTVGHIKAVD 314

Query: 293 GISFDLMPGETMAVVGESGSGKSTLARALLRLDEPDSGTALWKGRDLFALSPAELYKLRR 352
           GISF L  GET+ VVGESGSGK+TL   LLRL     G  ++ G  L  LS   +  LRR
Sbjct: 315 GISFSLKAGETLGVVGESGSGKTTLGLGLLRLVS-SQGAIVFSGTRLDGLSNTAMRPLRR 373

Query: 353 DLQMVFQDPTQSLNPRMTVYQLISEAWVIHPDILPKAKWRERVAELLVQVGLSAEHMSRY 412
            LQ+VFQDP  SL+PR++V ++I E   +H     +A  R  V + L +VGL      RY
Sbjct: 374 RLQIVFQDPYGSLSPRLSVGEIIGEGLAVHGLAGDRAGRRALVTQALSEVGLDPATQDRY 433

Query: 413 PHQFSGGQRQRIAIARALALEPQLIICDEAVSALDVSVQAQVIELLDRLRREMGIAFIFI 472
           PH+FSGGQRQRIAIARAL L+P++I+ DE  SALDV+VQAQ+++LL  ++    IA++FI
Sbjct: 434 PHEFSGGQRQRIAIARALVLKPEVIVLDEPTSALDVTVQAQIVDLLRDIQTRHAIAYVFI 493

Query: 473 AHDLPVVRDFADYVMVMQQGEVVELGTVREVFDTPRQAYTRALLAASLSPDPDA 526
           +HDL VVR  A  V+VM+ G+VVE G+  ++F  PR  YTRALLAA+LS + D+
Sbjct: 494 SHDLRVVRALAAQVLVMKDGKVVEAGSGEQIFQAPRHDYTRALLAAALSLEADS 547