Pairwise Alignments

Query, 548 a.a., oligopeptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 560 a.a., ABC transporter component (NCBI) from Rhodospirillum rubrum S1H

 Score =  444 bits (1142), Expect = e-129
 Identities = 253/529 (47%), Positives = 334/529 (63%), Gaps = 14/529 (2%)

Query: 1   MAEHLLEVRNLSVEFHTAAGVVHAVKSISYHLDKGETLAILGESGSGKSVSSSAIMNLID 60
           +A   L + +L V    +A    A+  IS  +   E + ++GESGSGKS+++ AIM L+ 
Sbjct: 8   LASPRLIIDDLRVALPKSADRPFALNGISLTVGADEIVCLVGESGSGKSMTAGAIMRLLG 67

Query: 61  MPPGRISSGEILLDGRDLLTMPAEERREVNGRRVAMIFQDPLSHLNPVYSVGWQISEAMT 120
            P   I+ G ILL+G DLL +     R V G RV MIFQ+P++ LNP++++G QI+E   
Sbjct: 68  -PSTPITGGRILLEGVDLLGLSEAAMRAVRGARVGMIFQEPMTALNPLHTIGDQIAETFR 126

Query: 121 THGLAG-SKAREEALRLLRRVGIPEPERAMRKYPHEFSGGQRQRVMIAMALALRPDLLIA 179
           THG  G ++     L LL  V IP+P  A + YPHE SGGQRQR MIAMALAL P LLIA
Sbjct: 127 THGTLGRAEIERRVLDLLAEVLIPDPVAAAKAYPHELSGGQRQRAMIAMALALEPALLIA 186

Query: 180 DEPTTALDVTVQAEVLKLLKELQRETGMAVLIITHDLGVVSEIADRVVVMEKGAIVEAGT 239
           DEPTTALDVT QA++L L+++LQR  G  VL +THD GVV+EIADRV VM  G +VE G 
Sbjct: 187 DEPTTALDVTTQAQILALIRDLQRRKGTGVLFVTHDFGVVAEIADRVAVMRGGEVVEEGA 246

Query: 240 VREIYKNPQHPYTQKLIAAAPGKGAMHEPGARAEPLLSVRDVRKTY--GSF--------E 289
             ++  +P HPYT+ LIAA P             PLL V  + KTY  G F         
Sbjct: 247 AAQVLNHPLHPYTRALIAAVPPLVPAPPRPVTGPPLLRVEGLSKTYRSGGFFGRGGRVTH 306

Query: 290 ALKGISFDLMPGETMAVVGESGSGKSTLARALLRLDEPDSGTALWKGRDLFALSPAELYK 349
           A+K +SF L  G T+ +VGESGSGKSTLAR ++RL   +SG+      DL AL+  + ++
Sbjct: 307 AVKDVSFTLRRGATLGIVGESGSGKSTLARCVVRLLTSESGSIHLDDIDLSALTDNDWHR 366

Query: 350 LRRDLQMVFQDPTQSLNPRMTVYQLISEAWVIHPDILPKAKWRERVAELLVQVGLSAEHM 409
             R +QMVFQDP  SLNPR  V +L+++  ++     P+ +   RV EL   VGL  + +
Sbjct: 367 ESRRIQMVFQDPYGSLNPRRRVGELVAQGPIVRG--APRREVEARVRELFALVGLDPKAV 424

Query: 410 SRYPHQFSGGQRQRIAIARALALEPQLIICDEAVSALDVSVQAQVIELLDRLRREMGIAF 469
            R+PH+FSGGQRQRI +ARALAL+P +++ DEAVSALDVSVQAQV+ LL  LR  + ++ 
Sbjct: 425 DRFPHEFSGGQRQRIGLARALALDPDVLVADEAVSALDVSVQAQVLALLADLRERLNLSV 484

Query: 470 IFIAHDLPVVRDFADYVMVMQQGEVVELGTVREVFDTPRQAYTRALLAA 518
           +FI HDL V    AD ++VM+ G VVE G    VF  P   YT+ L+AA
Sbjct: 485 LFITHDLRVAGQIADDILVMKDGAVVEAGPTARVFADPHHPYTKTLMAA 533



 Score =  199 bits (505), Expect = 3e-55
 Identities = 113/267 (42%), Positives = 158/267 (59%), Gaps = 14/267 (5%)

Query: 5   LLEVRNLSVEFHTAA------GVVHAVKSISYHLDKGETLAILGESGSGKSVSSSAIMNL 58
           LL V  LS  + +         V HAVK +S+ L +G TL I+GESGSGKS  +  ++ L
Sbjct: 282 LLRVEGLSKTYRSGGFFGRGGRVTHAVKDVSFTLRRGATLGIVGESGSGKSTLARCVVRL 341

Query: 59  IDMPPGRISSGEILLDGRDLLTMPAEERREVNGRRVAMIFQDPLSHLNPVYSVGWQISEA 118
           +        SG I LD  DL  +   +      RR+ M+FQDP   LNP   VG  +++ 
Sbjct: 342 LTS-----ESGSIHLDDIDLSALTDNDWHR-ESRRIQMVFQDPYGSLNPRRRVGELVAQG 395

Query: 119 MTTHGLAGSKAREEALRLLRRVGIPEPERAMRKYPHEFSGGQRQRVMIAMALALRPDLLI 178
               G    +       L   VG+    +A+ ++PHEFSGGQRQR+ +A ALAL PD+L+
Sbjct: 396 PIVRGAPRREVEARVRELFALVGLDP--KAVDRFPHEFSGGQRQRIGLARALALDPDVLV 453

Query: 179 ADEPTTALDVTVQAEVLKLLKELQRETGMAVLIITHDLGVVSEIADRVVVMEKGAIVEAG 238
           ADE  +ALDV+VQA+VL LL +L+    ++VL ITHDL V  +IAD ++VM+ GA+VEAG
Sbjct: 454 ADEAVSALDVSVQAQVLALLADLRERLNLSVLFITHDLRVAGQIADDILVMKDGAVVEAG 513

Query: 239 TVREIYKNPQHPYTQKLIAAAPGKGAM 265
               ++ +P HPYT+ L+AA PG+  M
Sbjct: 514 PTARVFADPHHPYTKTLMAAVPGRAWM 540