Pairwise Alignments

Query, 457 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 488 a.a., conserved hypothetical protein TIGR00148 (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  157 bits (396), Expect = 1e-42
 Identities = 112/413 (27%), Positives = 188/413 (45%), Gaps = 31/413 (7%)

Query: 46  QGRAPLLHFRNVEGVGGEVIANTFGSRERIARMFGTS----------------------- 82
           + + P L F N       V+AN FG+ +R+A   G                         
Sbjct: 41  RAQGPALLFENPTNHSMPVLANLFGTPKRVAMALGKDDPLALREVGELLAFLKEPEPPRG 100

Query: 83  -QDRLHEAYQARSRQALPPRLVDGGPVTECVEE-HDIDLGTLPMLKHFATDRAKYITSGI 140
            +D + +    +    +PP+ V      + V+   D+DL  LP+   +  D A  +T G+
Sbjct: 101 FKDAISKIPMFKQALNMPPKTVRNPACQQVVKTGDDVDLTQLPIQHCWPGDVAPLVTWGL 160

Query: 141 IIAEHPETGAGNLSYHRAMIHSKNELATS-LHSRGHLWRLLNMAKD-RGEKLKAAMVIGA 198
            I + P     NL  +R  +  KN+L    L  RG      +  +   GE+    + +G+
Sbjct: 161 TITKGPRKSRQNLGIYRQQLLGKNKLIMRWLSHRGGALDFADFKEQFPGERYPVVVALGS 220

Query: 199 HPLFMIAASARLAFGEDERDVAGGLIGEPLEVVRTPKYGIRVPAYAEIVLEGVIEPEAQV 258
            P+ ++ A   +     E   AG L GE  EV +     + VPA +EI+LEG I+P    
Sbjct: 221 DPVTILGAVTPVPDAMSEYAFAGLLRGERTEVCKALSCDLEVPASSEIILEGYIDPNEMA 280

Query: 259 AEGPFGEFTGYSSDRSTNNLFRVETFLRRKDAILVSVAGGNSSEHLNLGRIPREAEMVEK 318
            EGP+G+ TGY ++     +F V     RKD I  S   G   +   +  +      V  
Sbjct: 281 EEGPYGDHTGYYNETDKFPVFTVTHITHRKDPIYHSTYTGRPPDEPAMLGVALNEVFVPI 340

Query: 319 LKQRFPSVTAVHYPASGTHFH-AYVALNQTRPGEARQIMLG---LLGWDAYLKTVIAVDA 374
           L++++P +   + P  G  +  A +++ +  PG A+++M+G    L    Y K ++ VD 
Sbjct: 341 LRKQYPEIIDFYLPPEGCSYRMAVISIRKQYPGHAKRVMMGAWSFLRQFMYTKFIVVVDD 400

Query: 375 DVDITRDSDVLWAMSAHFQPHKDVVIIEGLPGNALDPSASGIGTTSRMGLDAT 427
           DV+    +DV+WA++    P +D V+I+  P + LD ++  +G  S+MGLDAT
Sbjct: 401 DVNCRDWNDVIWAITTRMDPKRDTVMIDNTPIDYLDFASPVVGLGSKMGLDAT 453