Pairwise Alignments

Query, 508 a.a., sugar ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 530 a.a., ABC transporter component (NCBI) from Rhodospirillum rubrum S1H

 Score =  348 bits (893), Expect = e-100
 Identities = 213/502 (42%), Positives = 294/502 (58%), Gaps = 16/502 (3%)

Query: 7   LLMDGIHKRFGPLIVSAGVTLDVEENEIHALLGENGAGKTVLMSILCGVLSPNEGQIVFK 66
           L++ GI KRF  LI +  V L V   EIHALLGENGAGK+ L+ I+ GVL  ++G I ++
Sbjct: 24  LVLRGIVKRFPGLIANDHVDLRVNAGEIHALLGENGAGKSTLVKIIYGVLQADDGVIEWE 83

Query: 67  GRPLKLGSPREAIKHRIGMVHQHFMLVPNLTVAENYVLGQGSPFSMIRDMRAVHA----- 121
           G P++L SP +A +  IGMV QHF L  +L+V EN  L            RAV A     
Sbjct: 84  GAPVRLSSPAQARQRGIGMVFQHFSLFESLSVVENIQLAMD---------RAVEADSLAN 134

Query: 122 RILELSDRYGLDVAPDALVSSLSVGERQRVEILKVLYHGIELLILDEPTAVLTPQETDRL 181
           R+ E+S RYGL + P   V+ LSVGERQRVEI++ L     LLI+DEPT+VLTPQE D L
Sbjct: 135 RVREVSARYGLAIDPTRTVNDLSVGERQRVEIVRCLLQTPRLLIMDEPTSVLTPQEADTL 194

Query: 182 LHLLRQLVADGKTVIFISHKLDEVMRVSDRVSVMRDAKVVRTVKTSETTARELARMMVGR 241
              LR+L  +G ++++ISHKLDE+  +    +V+R  KVV      E T+RELA+MM+G 
Sbjct: 195 FETLRRLAGEGVSILYISHKLDEIRALCQSATVLRAGKVVGACDPREKTSRELAQMMIGD 254

Query: 242 DVLMYLPRAPLEPGRVVLSVEHLSCDGEAGLPA-LRDVSFEVRANEIVGIAGVSGNGQSE 300
           ++     R     G + L V+ LS   +      LRDVS +VRA EI+GIAGV+GNGQ  
Sbjct: 255 ELAAVERRVAHGGGDLRLVVDRLSMAADTPFGVDLRDVSLKVRAGEILGIAGVAGNGQGA 314

Query: 301 LALALTGLLPVASG-SVTLDGTQLAGLSSYEINQLPMAHIPEDRHRMGIVLPLPLTENVI 359
           L  AL+G    A G +V ++G  +  L   E   L +A +PE+R   G V  L L EN +
Sbjct: 315 LVAALSGERHAARGDAVRIEGQPVGHLGPRERRALGLAVVPEERLGRGTVPELSLAENAL 374

Query: 360 LQRFDKPPFSSRGLLDLNEITRQTRDLMRRFKVKASGPGDRIRNLSGGNQQKLVVGRELD 419
           L  + +      G +D        R ++  F V+A G     R+LSGGN QK ++GRE+ 
Sbjct: 375 LSSYRQGDLVRGGFVDQGRTHGLARRIIDVFGVRAGGSRAAARSLSGGNLQKFIIGREIM 434

Query: 420 RRFDFLLINQLTRGIDIGATELVMHKILEQRSAGKAILLISTELEELFTLSDRILVMYEG 479
           ++   L+ +Q T G+D GA   +   +L+ R  G  IL+IS +L+ELF +SDRI VM  G
Sbjct: 435 QKPKLLVASQPTWGVDAGAAAAIHRALLDLRDQGAGILIISQDLDELFAISDRIAVMCGG 494

Query: 480 RLVGEIPPDRSRLEEIGLLMAG 501
           +L    P   + LE++GL+M G
Sbjct: 495 KLSEARPSHEATLEQVGLMMGG 516