Pairwise Alignments

Query, 546 a.a., oligopeptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 536 a.a., microcin ABC transporter ATP-binding protein from Pseudomonas fluorescens FW300-N2C3

 Score =  452 bits (1164), Expect = e-131
 Identities = 246/535 (45%), Positives = 345/535 (64%), Gaps = 10/535 (1%)

Query: 1   MTGPHLLEVKDLTVDFLSLGGAFRATSGVSFHVDAGETLVILGESGSGKSVSASAIMGLI 60
           M   +L+EV+DL V+F+      R   GVSF +  GETL ++GESGSGKSV+A +I+ L+
Sbjct: 1   MNQDNLIEVRDLAVEFIVGERRQRVVEGVSFDIKRGETLALVGESGSGKSVTAHSILRLL 60

Query: 61  DTPPGDICAGSVAYRGRDLSSLSEGERRDLNGRRIAMIFQDPLSHLNPVYTIGWQLEEVF 120
             P      G++ Y G+DL  L E   R + G RIAMIFQ+P++ LNP++ I  Q+ EV 
Sbjct: 61  PYPLAHHPTGTIQYAGQDLLGLKEKTIRHIRGNRIAMIFQEPMTSLNPLHCIEKQINEVL 120

Query: 121 TVHGVASGAEARQRAIEILGRVGIPEPEKRIDQYPHQFSGGQRQRIMIGMAIALRPEILI 180
            +H   SG  A +R +E+L  VGIPEP KR+   PH+ SGGQRQR+MI MA+A  PE+LI
Sbjct: 121 GIHKGLSGKVATRRTLELLELVGIPEPHKRLKALPHELSGGQRQRVMIAMALANEPELLI 180

Query: 181 ADEPTTALDVSVQAQILELLKKLQAEDGLAIIMITHDLEVAANMADRVIVMKSGRIVEEG 240
           ADEPTTALDV+VQ +IL+LLK+LQA  G+++++I+HDL +   +A RV VM+ G IVE+ 
Sbjct: 181 ADEPTTALDVTVQLKILQLLKELQARLGMSLLLISHDLNLVRRIAHRVCVMQRGCIVEQA 240

Query: 241 EARAVFENPAHSYTRTLINALPHADDRAPPRPA-RPAGKPILEVKNIDKFYTLSSGFFAK 299
               +F  P H YTR L+ A P         PA    G P+L+V+++  ++ +  G F +
Sbjct: 241 SCEELFRAPQHPYTRELLGAEPSG------TPANNVVGPPLLQVEDLKVWFPIKKGLFKR 294

Query: 300 PA-RLHAVKNLSFDVAAGETIGIVGESGSGKSTVARVLLGLNEASGGEALFHGRDVLKMD 358
               + AV  + F +  G+T+GIVGESGSGKST+   +L L  + GG   F G+ +  + 
Sbjct: 295 TVDYIKAVDGIRFSLPQGQTLGIVGESGSGKSTLGLAILRLIGSQGG-IRFEGKPLDSLT 353

Query: 359 RKQLLAFRRKVQMVFQDPYSSMNPRMTVFDIVSEPWRIHKDILEKTRWRDRVTELLGLVG 418
           ++Q+   RR++Q+VFQDP+ S++PRM V  IV E  RIHK I         +   L  VG
Sbjct: 354 QQQVRPLRREMQVVFQDPFGSLSPRMCVSQIVGEGLRIHK-IGTAAEQEQAIIAALKEVG 412

Query: 419 LNPEHAKRYPHQFSGGQRQRIAIARALACDPELVVCDEAVSALDVSVQVQVIDLLAELRD 478
           L+PE   RYPH+FSGGQRQRIAIARAL   P L++ DE  SALD +VQ QV++LL  L+ 
Sbjct: 413 LDPETRNRYPHEFSGGQRQRIAIARALVLKPALILLDEPTSALDRTVQRQVVELLRSLQT 472

Query: 479 RLGLAYIFITHDLPIVRHFADRIIVMKSGEIVEHATTEEIFRNPQHAYTRQLINA 533
           +  L Y+FI+HDL +V+  + +++V+K G++VE      IF  PQH YT+QL+ A
Sbjct: 473 KYNLTYLFISHDLAVVKALSHQLMVVKHGQVVEQGDARSIFAAPQHPYTQQLLEA 527



 Score =  194 bits (493), Expect = 7e-54
 Identities = 111/259 (42%), Positives = 159/259 (61%), Gaps = 9/259 (3%)

Query: 285 NIDKFYTLSSGFFAKPARLHAVKNLSFDVAAGETIGIVGESGSGKSTVARVLLGL----- 339
           N+ +   L+  F     R   V+ +SFD+  GET+ +VGESGSGKS  A  +L L     
Sbjct: 5   NLIEVRDLAVEFIVGERRQRVVEGVSFDIKRGETLALVGESGSGKSVTAHSILRLLPYPL 64

Query: 340 NEASGGEALFHGRDVLKMDRKQLLAFR-RKVQMVFQDPYSSMNPRMTVFDIVSEPWRIHK 398
                G   + G+D+L +  K +   R  ++ M+FQ+P +S+NP   +   ++E   IHK
Sbjct: 65  AHHPTGTIQYAGQDLLGLKEKTIRHIRGNRIAMIFQEPMTSLNPLHCIEKQINEVLGIHK 124

Query: 399 DILEKTRWRDRVTELLGLVGLNPEHA--KRYPHQFSGGQRQRIAIARALACDPELVVCDE 456
            +  K   R R  ELL LVG+   H   K  PH+ SGGQRQR+ IA ALA +PEL++ DE
Sbjct: 125 GLSGKVATR-RTLELLELVGIPEPHKRLKALPHELSGGQRQRVMIAMALANEPELLIADE 183

Query: 457 AVSALDVSVQVQVIDLLAELRDRLGLAYIFITHDLPIVRHFADRIIVMKSGEIVEHATTE 516
             +ALDV+VQ++++ LL EL+ RLG++ + I+HDL +VR  A R+ VM+ G IVE A+ E
Sbjct: 184 PTTALDVTVQLKILQLLKELQARLGMSLLLISHDLNLVRRIAHRVCVMQRGCIVEQASCE 243

Query: 517 EIFRNPQHAYTRQLINATP 535
           E+FR PQH YTR+L+ A P
Sbjct: 244 ELFRAPQHPYTRELLGAEP 262