Pairwise Alignments

Query, 546 a.a., oligopeptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 539 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  459 bits (1181), Expect = e-133
 Identities = 240/530 (45%), Positives = 347/530 (65%), Gaps = 6/530 (1%)

Query: 6   LLEVKDLTVDFLSLGGAFRATSGVSFHVDAGETLVILGESGSGKSVSASAIMGLIDTPPG 65
           LL+V++L+V F +  G   A   VSF +  GETL I+GESGSGKSVS +A+M L+     
Sbjct: 6   LLQVRNLSVSFTTNDGVVDAVKNVSFDIRPGETLAIVGESGSGKSVSTNALMQLLPKNAR 65

Query: 66  DICAGSVAYRGRDLSSLSEGERRDLNGRRIAMIFQDPLSHLNPVYTIGWQLEEVFTVHGV 125
                S+ + G +L + ++ + R + G RI MIFQ+P++ LNP   +G Q+ E    H  
Sbjct: 66  IHPESSIMFEGEELLNKTDTQMRRIRGDRIGMIFQEPMTSLNPYMRVGVQVAEAIRCHRN 125

Query: 126 ASGAEARQRAIEILGRVGIPEPEKRIDQYPHQFSGGQRQRIMIGMAIALRPEILIADEPT 185
            S  +A+QR +E+   V +P+P+    ++PH+FSGGQ QRIMI MA+   P+ILIADEPT
Sbjct: 126 VSQNQAKQRVLELFQLVHLPDPKGAYQKFPHEFSGGQLQRIMIAMALINEPDILIADEPT 185

Query: 186 TALDVSVQAQILELLKKLQAEDGLAIIMITHDLEVAANMADRVIVMKSGRIVEEGEARAV 245
           TALDV+VQA++L L+K++QA  G+AI+ ITHDL V   +ADRV+VM  G +VE+G    +
Sbjct: 186 TALDVTVQAEVLRLIKEIQANMGMAILFITHDLGVVKFVADRVLVMCKGDVVEQGSTEQL 245

Query: 246 FENPAHSYTRTLINALPHADDRAPPRPARPAGKPILEVKNIDKFYTLSSGFFAKPAR-LH 304
           F  P H YTR LIN++P    +    P      P+L+ ++I   + +   F ++  +   
Sbjct: 246 FLQPEHDYTRMLINSIP----KGSKDPVAVDAAPLLKAEDIRVKFLVKPYFISRRNQYFE 301

Query: 305 AVKNLSFDVAAGETIGIVGESGSGKSTVARVLLGLNEASGGEALFHGRDVLKMDRKQLLA 364
           AVK +S ++  GET+GIVGESGSGKST+ R L+GL  ++G +  F G+D   +  KQ LA
Sbjct: 302 AVKGISLELKQGETLGIVGESGSGKSTLGRALIGLLPSTG-QIAFKGQDFRALSEKQRLA 360

Query: 365 FRRKVQMVFQDPYSSMNPRMTVFDIVSEPWRIHKDILEKTRWRDRVTELLGLVGLNPEHA 424
            ++ +QMVFQDPY S++PRMTV +I++E   +H+  + K     R    L  V L+P   
Sbjct: 361 LKKDIQMVFQDPYGSLSPRMTVGEIITEGLLVHQPHISKLERMQRARRALEEVRLDPNSI 420

Query: 425 KRYPHQFSGGQRQRIAIARALACDPELVVCDEAVSALDVSVQVQVIDLLAELRDRLGLAY 484
            RYPH+FSGGQRQRIAIARAL  +P  ++ DE  SALD SVQ+ VI+LL E++ R  + Y
Sbjct: 421 NRYPHEFSGGQRQRIAIARALILEPSFILLDEPTSALDRSVQLTVIELLKEIQKRRNIGY 480

Query: 485 IFITHDLPIVRHFADRIIVMKSGEIVEHATTEEIFRNPQHAYTRQLINAT 534
           +FI+HDL +V+  +DR++VM+ G+++E  + E IF NPQH YT++LI A+
Sbjct: 481 LFISHDLAVVKALSDRVLVMQKGQVMEQGSAESIFHNPQHEYTKKLIAAS 530



 Score =  204 bits (518), Expect = 9e-57
 Identities = 116/277 (41%), Positives = 177/277 (63%), Gaps = 16/277 (5%)

Query: 279 PILEVKNIDKFYTLSSGFFAKPARLHAVKNLSFDVAAGETIGIVGESGSGKSTVARVLLG 338
           P+L+V+N+   +T + G       + AVKN+SFD+  GET+ IVGESGSGKS     L+ 
Sbjct: 5   PLLQVRNLSVSFTTNDGV------VDAVKNVSFDIRPGETLAIVGESGSGKSVSTNALMQ 58

Query: 339 LNEASG-----GEALFHGRDVLKMDRKQLLAFRR-KVQMVFQDPYSSMNPRMTVFDIVSE 392
           L   +         +F G ++L     Q+   R  ++ M+FQ+P +S+NP M V   V+E
Sbjct: 59  LLPKNARIHPESSIMFEGEELLNKTDTQMRRIRGDRIGMIFQEPMTSLNPYMRVGVQVAE 118

Query: 393 PWRIHKDILEKTRWRDRVTELLGLVGL-NPEHA-KRYPHQFSGGQRQRIAIARALACDPE 450
             R H+++  + + + RV EL  LV L +P+ A +++PH+FSGGQ QRI IA AL  +P+
Sbjct: 119 AIRCHRNV-SQNQAKQRVLELFQLVHLPDPKGAYQKFPHEFSGGQLQRIMIAMALINEPD 177

Query: 451 LVVCDEAVSALDVSVQVQVIDLLAELRDRLGLAYIFITHDLPIVRHFADRIIVMKSGEIV 510
           +++ DE  +ALDV+VQ +V+ L+ E++  +G+A +FITHDL +V+  ADR++VM  G++V
Sbjct: 178 ILIADEPTTALDVTVQAEVLRLIKEIQANMGMAILFITHDLGVVKFVADRVLVMCKGDVV 237

Query: 511 EHATTEEIFRNPQHAYTRQLINATPK-PKWQTAADAA 546
           E  +TE++F  P+H YTR LIN+ PK  K   A DAA
Sbjct: 238 EQGSTEQLFLQPEHDYTRMLINSIPKGSKDPVAVDAA 274