Pairwise Alignments

Query, 546 a.a., oligopeptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 553 a.a., ABC transporter component (NCBI) from Rhodospirillum rubrum S1H

 Score =  446 bits (1146), Expect = e-129
 Identities = 245/531 (46%), Positives = 343/531 (64%), Gaps = 7/531 (1%)

Query: 4   PHLLEVKDLTVDFLSLGGAFRATSGVSFHVDAGETLVILGESGSGKSVSASAIMGLIDTP 63
           P LL V++L V F +   A  A  GVSF +  GETL ++GESGSGKSV+A +I  L+  P
Sbjct: 15  PPLLSVENLQVRFGAGPEAVDAVRGVSFTIAKGETLALVGESGSGKSVTALSITRLLPYP 74

Query: 64  PGDICAGSVAYRGRDLSSLSEGERRDLNGRRIAMIFQDPLSHLNPVYTIGWQLEEVFTVH 123
           P     G++ +   DL        RD+ G RI+MIFQ+P++ LNP+++I  Q+ EV T+H
Sbjct: 75  PASHPGGAIFFDSEDLLHAPGARLRDVRGNRISMIFQEPMTSLNPLHSIERQVGEVLTLH 134

Query: 124 GVASGAEARQRAIEILGRVGIPEPEKRIDQYPHQFSGGQRQRIMIGMAIALRPEILIADE 183
               G   R R I++L  VG+P+ E R+   PH+ SGGQRQR+MI MA+A  P++LIADE
Sbjct: 135 KGLHGKARRARVIDLLRLVGLPQVEGRLGALPHELSGGQRQRVMIAMALANEPDLLIADE 194

Query: 184 PTTALDVSVQAQILELLKKLQAEDGLAIIMITHDLEVAANMADRVIVMKSGRIVEEGEAR 243
           PTTALDV++QAQIL LL  LQ   G+AI+ ITHDL +   +ADRV VMK G IVE G   
Sbjct: 195 PTTALDVTIQAQILALLADLQKRFGMAILFITHDLSIVRRVADRVAVMKDGLIVETGTTA 254

Query: 244 AVFENPAHSYTRTLINALPHADDRAPPRPARPAGKPILEVKNIDKFYTLSSGFFAKP-AR 302
           A+F  P+H YT+ L+ + P    R  PR   P    IL   ++  ++ +  G   +    
Sbjct: 255 ALFAAPSHPYTKALLASEP----RGTPRLV-PNAPEILSCDDLKVWFPIRKGVIRRTVGH 309

Query: 303 LHAVKNLSFDVAAGETIGIVGESGSGKSTVARVLLGLNEASGGEALFHGRDVLKMDRKQL 362
           + AV  +SF + AGET+G+VGESGSGK+T+   LL L  +S G  +F G  +  +    +
Sbjct: 310 IKAVDGISFSLKAGETLGVVGESGSGKTTLGLGLLRL-VSSQGAIVFSGTRLDGLSNTAM 368

Query: 363 LAFRRKVQMVFQDPYSSMNPRMTVFDIVSEPWRIHKDILEKTRWRDRVTELLGLVGLNPE 422
              RR++Q+VFQDPY S++PR++V +I+ E   +H    ++   R  VT+ L  VGL+P 
Sbjct: 369 RPLRRRLQIVFQDPYGSLSPRLSVGEIIGEGLAVHGLAGDRAGRRALVTQALSEVGLDPA 428

Query: 423 HAKRYPHQFSGGQRQRIAIARALACDPELVVCDEAVSALDVSVQVQVIDLLAELRDRLGL 482
              RYPH+FSGGQRQRIAIARAL   PE++V DE  SALDV+VQ Q++DLL +++ R  +
Sbjct: 429 TQDRYPHEFSGGQRQRIAIARALVLKPEVIVLDEPTSALDVTVQAQIVDLLRDIQTRHAI 488

Query: 483 AYIFITHDLPIVRHFADRIIVMKSGEIVEHATTEEIFRNPQHAYTRQLINA 533
           AY+FI+HDL +VR  A +++VMK G++VE  + E+IF+ P+H YTR L+ A
Sbjct: 489 AYVFISHDLRVVRALAAQVLVMKDGKVVEAGSGEQIFQAPRHDYTRALLAA 539



 Score =  201 bits (512), Expect = 5e-56
 Identities = 122/276 (44%), Positives = 165/276 (59%), Gaps = 15/276 (5%)

Query: 269 PPRPARPAGKPILEVKNIDKFYTLSSGFFAKPARLHAVKNLSFDVAAGETIGIVGESGSG 328
           PP P  P   P+L V+N      L   F A P  + AV+ +SF +A GET+ +VGESGSG
Sbjct: 6   PPLPVAPLLPPLLSVEN------LQVRFGAGPEAVDAVRGVSFTIAKGETLALVGESGSG 59

Query: 329 KSTVARV---LLGLNEAS--GGEALFHGRDVLKMDRKQLLAFR-RKVQMVFQDPYSSMNP 382
           KS  A     LL    AS  GG   F   D+L     +L   R  ++ M+FQ+P +S+NP
Sbjct: 60  KSVTALSITRLLPYPPASHPGGAIFFDSEDLLHAPGARLRDVRGNRISMIFQEPMTSLNP 119

Query: 383 RMTVFDIVSEPWRIHKDILEKTRWRDRVTELLGLVGLNPEHAK--RYPHQFSGGQRQRIA 440
             ++   V E   +HK +  K R R RV +LL LVGL     +    PH+ SGGQRQR+ 
Sbjct: 120 LHSIERQVGEVLTLHKGLHGKAR-RARVIDLLRLVGLPQVEGRLGALPHELSGGQRQRVM 178

Query: 441 IARALACDPELVVCDEAVSALDVSVQVQVIDLLAELRDRLGLAYIFITHDLPIVRHFADR 500
           IA ALA +P+L++ DE  +ALDV++Q Q++ LLA+L+ R G+A +FITHDL IVR  ADR
Sbjct: 179 IAMALANEPDLLIADEPTTALDVTIQAQILALLADLQKRFGMAILFITHDLSIVRRVADR 238

Query: 501 IIVMKSGEIVEHATTEEIFRNPQHAYTRQLINATPK 536
           + VMK G IVE  TT  +F  P H YT+ L+ + P+
Sbjct: 239 VAVMKDGLIVETGTTAALFAAPSHPYTKALLASEPR 274