Pairwise Alignments

Query, 307 a.a., peptide ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 325 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  194 bits (493), Expect = 2e-54
 Identities = 107/318 (33%), Positives = 175/318 (55%), Gaps = 16/318 (5%)

Query: 1   MFAFILRRAGQSLIAVIGLLVLVFFLSRLTGDPAYLYLPLDSSEAQRQAFSETHGFNDPL 60
           MF+F+++R  Q+LI +  + ++ F +    GDP    +    SEA+RQA  +  G NDP 
Sbjct: 1   MFSFLVKRLYQALIVMFVISLVAFAIQDNLGDPLRELVGQSVSEAERQALRDELGLNDPF 60

Query: 61  VVQFGRYLVDLARFDFGDALSRNRPAMEVALEAFPQTLKLAVIAIVLSLCFAVVVGSLAA 120
           ++++ R++    + D G +    RPA+EV  +    TL+L   A ++ + F++ +G  +A
Sbjct: 61  IIKYSRFVTAAVQGDLGTSYFFKRPALEVIFDKLVATLELVFGATLIIIVFSIPLGVYSA 120

Query: 121 ARPNSLFDKIASTASLAGASAPDFWVAIVAILVFSVGLGLLPTSGTGTAL---------- 170
             P SLF KI    S  G S P F  AI+ + VFS+ LG LP+ G G  +          
Sbjct: 121 IHPKSLFTKIVMAGSSIGISIPVFLTAIMLMYVFSIELGWLPSYGRGETVNLLGWESGFF 180

Query: 171 ------HWIMPIFVLTLRPFGLLVQVVRGTMMGALASPYVKTARAKGVNRSRIVFRHALR 224
                 H ++P   L      L +++VR  M+  L+S Y+K A+AKG+  ++I ++HAL+
Sbjct: 181 TLDGLRHLVLPSIALASIMLPLFIRLVRSEMLEVLSSEYIKFAQAKGLPLNKIYYQHALK 240

Query: 225 NSLLPVITVAGDLAASLVNGAVVVETIFGWPGIGKLMIDAIVRRDFALIQATVLVTAIAI 284
           N++LPV+TV G    ++V   ++ ET+F WPG G L ++AI R D  LI A V+   +  
Sbjct: 241 NTMLPVLTVGGVQIGTMVAYTILTETVFQWPGTGFLFLEAINRVDTPLITAYVIFVGLIF 300

Query: 285 FVLNIAIDLVYARLDPRI 302
            V N  +DL+Y  ++P +
Sbjct: 301 VVTNTIVDLLYGLINPTV 318