Pairwise Alignments

Query, 307 a.a., peptide ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 336 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

 Score =  186 bits (472), Expect = 7e-52
 Identities = 115/333 (34%), Positives = 173/333 (51%), Gaps = 30/333 (9%)

Query: 1   MFAFILRRAGQSLIAVIGLLVLVFFLSRLT-GDPAYLYLPLDSSEAQRQAFSETH-GFND 58
           M +FILRR    + A IG+ +L F L  L  GDP  +          R A   T  G + 
Sbjct: 1   MISFILRRVVLIIPAFIGVTLLAFALIHLIPGDPILVMAGERGVSPARHAMLMTQLGLDR 60

Query: 59  PLVVQFGRYLVDLARFDFGDALSRNRPAMEVALEAFPQTLKLAVIAIVLSLCFAVVVGSL 118
           PL  Q+  YL    + D G+++   +P +E     FP T++L V A+V ++   +  G L
Sbjct: 61  PLWEQYLTYLGKALQGDLGNSIVTRQPVIEEFKTLFPATIELGVFAMVFAVLIGIPAGML 120

Query: 119 AAARPNSLFDKIASTASLAGASAPDFWVAIVAILVFSVGLGLLPTSG-----------TG 167
           AA +  +  D      SL G S P FW  ++ I++ S  LG  P SG           TG
Sbjct: 121 AAVKRGTSLDHGVMVVSLTGYSMPIFWWGLLLIMLVSGILGWTPVSGRIDSIMWIDTVTG 180

Query: 168 TAL-----------------HWIMPIFVLTLRPFGLLVQVVRGTMMGALASPYVKTARAK 210
             L                 H I+P  V+   P  ++ ++ R  M+  L   YV+TARAK
Sbjct: 181 FMLIDSLLSDEPGAFLSAVHHLILPAIVVGTIPLAVIARMTRSAMLEVLREDYVRTARAK 240

Query: 211 GVNRSRIVFRHALRNSLLPVITVAGDLAASLVNGAVVVETIFGWPGIGKLMIDAIVRRDF 270
           GV+  R+V  HALRN+L+PVITV G     L+ GA++ ETIF WPG+GK ++D+I RRD+
Sbjct: 241 GVSPGRVVMVHALRNALIPVITVIGLQTGVLLAGAILTETIFAWPGVGKWLVDSINRRDY 300

Query: 271 ALIQATVLVTAIAIFVLNIAIDLVYARLDPRIR 303
             +Q  +L+ +  + ++N+ +D++Y  ++PRIR
Sbjct: 301 PAVQGGILLISTVVILVNLLVDVLYGVINPRIR 333