Pairwise Alignments

Query, 307 a.a., peptide ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 314 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

 Score =  203 bits (516), Expect = 5e-57
 Identities = 110/307 (35%), Positives = 172/307 (56%), Gaps = 4/307 (1%)

Query: 1   MFAFILRRAGQSLIAVIGLLVLVFFLSRL-TGDPAYLYLPLDSSEAQRQAFSETH---GF 56
           M +F+L+R    +  ++G  +++F + RL   DPA  YL L       QA +ET    G 
Sbjct: 1   MVSFVLKRLALLVPMLLGASLVIFLMLRLGPSDPAMDYLRLSRIPPTVQALAETRQRLGL 60

Query: 57  NDPLVVQFGRYLVDLARFDFGDALSRNRPAMEVALEAFPQTLKLAVIAIVLSLCFAVVVG 116
           + PL VQ+  +L      DFG + +  RP +   L   P TL LA +A+ L+L  ++ +G
Sbjct: 61  DQPLAVQYWVWLNKALHLDFGVSYATGRPVLPDLLHYLPATLHLAGVALALTLGLSIPLG 120

Query: 117 SLAAARPNSLFDKIASTASLAGASAPDFWVAIVAILVFSVGLGLLPTSGTGTALHWIMPI 176
             AA R ++L D+I    +  G S P+FW+  + +LVFSV LG LP  G G A H IMP 
Sbjct: 121 MWAARRRDALPDQIVRGVAFLGVSMPNFWLGFLLVLVFSVELGWLPAMGRGGAEHMIMPA 180

Query: 177 FVLTLRPFGLLVQVVRGTMMGALASPYVKTARAKGVNRSRIVFRHALRNSLLPVITVAGD 236
             +      +  +++R +M+      +V  AR +G++ +++   H LRN+LLP+IT  G 
Sbjct: 181 VAIAFMSLSINARLLRASMLEVSGQRHVYYARLRGLSAAKVERAHILRNALLPIITATGM 240

Query: 237 LAASLVNGAVVVETIFGWPGIGKLMIDAIVRRDFALIQATVLVTAIAIFVLNIAIDLVYA 296
               L+ G +V+E+IFGWPG+G+  + AI  RD+ +IQ   L+  +   + N+ +D+VYA
Sbjct: 241 HVGELIGGTLVIESIFGWPGVGRFAVSAIFNRDYPVIQCFTLLMVLIFVLCNLIVDIVYA 300

Query: 297 RLDPRIR 303
             DPRIR
Sbjct: 301 WADPRIR 307