Pairwise Alignments

Query, 307 a.a., peptide ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 326 a.a., dipeptide transport system permease protein DppB from Phaeobacter inhibens DSM 17395

 Score =  183 bits (465), Expect = 4e-51
 Identities = 106/319 (33%), Positives = 169/319 (52%), Gaps = 17/319 (5%)

Query: 1   MFAFILRRAGQSLIAVIGLLVLVFFLSRLTGDPAYLYLPLDSSEAQRQAFSETHGFNDPL 60
           M A++++R  Q++  +  + ++ F +    GDP    +    SE  RQ   +  G ND  
Sbjct: 1   MLAYLVKRVFQAIAVMFAISLIGFAIQDNLGDPLRELVGQSVSEEVRQQLRDELGLNDSF 60

Query: 61  VVQFGRYLVDLARFDFGDALSRNRPAMEVALEAFPQTLKLAVIAIVLSLCFAVVVGSLAA 120
           V Q+ R+L +  + D G +     PA++V L+  P TL+L + A ++ +  +V +G   A
Sbjct: 61  VTQYVRFLGNALQGDLGTSYFFKEPALDVILKKLPATLELVMGATLIIVGLSVPLGVYTA 120

Query: 121 ARPNSLFDKIASTASLAGASAPDFWVAIVAILVFSVGLGLLPTSGTGTALH--------- 171
            +PN++  ++    S+ G S P F  AI+ I VFSV LG  P+ G G  +H         
Sbjct: 121 IKPNTILSRLIMGISIVGISVPVFLTAILMIFVFSVELGWFPSYGRGDVVHVFGYWDTNF 180

Query: 172 -----WI---MPIFVLTLRPFGLLVQVVRGTMMGALASPYVKTARAKGVNRSRIVFRHAL 223
                W+   +P   L      L V+++R  MM  L S YVK ARAKG+   RI F HAL
Sbjct: 181 ATADGWVHILLPSVALASIMLPLFVRLIRAEMMEVLQSEYVKYARAKGIRPYRIYFIHAL 240

Query: 224 RNSLLPVITVAGDLAASLVNGAVVVETIFGWPGIGKLMIDAIVRRDFALIQATVLVTAIA 283
           +N+LLPVITV G    ++V   ++ ET+F WPG+G + ++A+ R D  LI A +++    
Sbjct: 241 KNTLLPVITVGGVQIGTMVAYTILTETVFQWPGMGFMFLEAVNRVDTPLIVAYLIIVGFI 300

Query: 284 IFVLNIAIDLVYARLDPRI 302
             V N  +DL+Y  ++P +
Sbjct: 301 FVVTNTIVDLIYGLVNPTV 319