Pairwise Alignments

Query, 307 a.a., peptide ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 339 a.a., dipeptide ABC transporter permease DppB from Klebsiella michiganensis M5al

 Score =  197 bits (500), Expect = 4e-55
 Identities = 115/336 (34%), Positives = 179/336 (53%), Gaps = 33/336 (9%)

Query: 1   MFAFILRRAGQSLIAVIGLLVLVF-FLSRLTGDPAYLYLPLDSSEAQRQA-FSETHGFND 58
           M  FILRR G  +   IG+ +L F F+  + GDP  +         +R A      G + 
Sbjct: 1   MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAEMGLDK 60

Query: 59  PLVVQFGRYLVDLARFDFGDALSRNRPAMEVALEAFPQTLKLAVIAIVLSLCFAVVVGSL 118
           P+  Q+  Y+  +   D G +L    P  E  +  F  T++L V A++ ++   + VG L
Sbjct: 61  PMWQQYVNYIWGVMHGDLGISLKSRIPVWEEFVPRFKATMELGVCAMIFAIIVGIPVGVL 120

Query: 119 AAARPNSLFDKIASTASLAGASAPDFWVAIVAILVFSVGLGLLPTSG------------- 165
           AA +  S+FD  +   +L G S P FW  ++ I++ SV L L P SG             
Sbjct: 121 AAVKRGSIFDHTSVGLALTGYSMPIFWWGMMLIMLVSVQLNLTPVSGRISDTVFLDDTLP 180

Query: 166 -TG-----------------TALHWIMPIFVLTLRPFGLLVQVVRGTMMGALASPYVKTA 207
            TG                   +H I+P  VL   P  ++V++ R +M+  L   Y++TA
Sbjct: 181 LTGFMLIDTAIWGEPGDFIDAVMHMILPAVVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240

Query: 208 RAKGVNRSRIVFRHALRNSLLPVITVAGDLAASLVNGAVVVETIFGWPGIGKLMIDAIVR 267
           RAKG+ R R++  HALRN++LPV+TV G    +L+ GA++ ETIF WPG+G+ +IDA+ R
Sbjct: 241 RAKGLTRMRVIVVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300

Query: 268 RDFALIQATVLVTAIAIFVLNIAIDLVYARLDPRIR 303
           RD+ ++Q  VL+ A  I ++N+ +DL+Y  ++PRIR
Sbjct: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336