Pairwise Alignments

Query, 502 a.a., peptide ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 518 a.a., nickel/dipeptide/oligopeptide ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  110 bits (274), Expect = 2e-28
 Identities = 126/498 (25%), Positives = 226/498 (45%), Gaps = 58/498 (11%)

Query: 9   AVALLTATLFSGVAMAAEGEVKIVLPEQPANLDPCRSIRSDIGRIINSNITETLTVIDTE 68
           A+AL+ A L  G AMAA+  + +     P ++DP   +    G +  S++     +  T+
Sbjct: 9   ALALIAAGLSFG-AMAAD--ITVAYDADPVSMDPHEQLSG--GTLQLSHMVFDPLIRFTQ 63

Query: 69  KGTVGPWLAEKWEQVDDLTWRVHLKSGVKFQDGAAFDAEAVVKSINRLMNPGLTCDSRSK 128
           K    P LAE W++VD+ T R  L+ GVKF  G  F A+ VV + NRL     + D +  
Sbjct: 64  KMEFEPRLAESWQRVDNETMRFTLRKGVKFHSGNDFTADDVVWTFNRLKE---SADFKGI 120

Query: 129 FGDVKLTPKAVDAQTVEISSDSPVPIMPTL------------LGT-------VQIVSPNM 169
           F  +    K VD  T+EI +    P++  +             GT        +IV    
Sbjct: 121 FEPLVSLTK-VDDYTIEIKTAGTYPLIENVATYIFPMDSKFYTGTTADGKNKAEIVKHGN 179

Query: 170 PFDKESNDPVGTGPYVVESK-SNEQIVLKRHDAYW--GAKPDVTRATYVWRSESAIRAAM 226
            F  E+    GTGP+ V ++    ++  +R+  YW   +K +V + T     E A R A 
Sbjct: 180 SFASENIS--GTGPFTVTAREQGVKLEFQRNPNYWDKASKGNVDKLTLAVIKEDATRVAA 237

Query: 227 VESGEADMTPSIA------VQDATNAESDFAYLNSETTRMRIDAQI-PPLDDVRIRKALN 279
           + SG  DM   ++      ++DA   +  F    +     +++    P L DVR+R+A+ 
Sbjct: 238 LLSGGVDMIAPVSPNDYQRIKDAKGVDL-FTMPGTRVITFQMNQNSNPALKDVRVRQAIV 296

Query: 280 MAIDWDGMGEALFGKDVLRASQMVVPGVRGHNPDIKPWTYNPEEAMKLVEEAKAAGAPVD 339
            AI+ +G+ + +       A+Q    G  G+N ++KP  ++  +A +L++E   AG    
Sbjct: 297 YAINNEGIVDKVMKGAATTAAQQSPVGYAGYNENLKP-RFDLNKAKELMKE---AGYEKG 352

Query: 340 KEIVLIGRNGFFPNSAESLEAMRSMWQEIGLNVSIRQLEAADWVRYLDKPFPEGRGPTLF 399
             + +I  N  + N  +  +A  +M  +IG+ V ++ +  A +    DK   +     L 
Sbjct: 353 FNLTMIAPNNRYVNDEKIAQAASAMLSKIGIKVDLKTMPKAQYWPEFDKCAAD----MLM 408

Query: 400 QQQHDNNTGDAGFTAPVMY-----LSEGQYST--IADPDLDVVLKKAMAATG-DEREKLF 451
              H +    A FT  +         +GQY+    ++ ++D ++  A   T  ++R  + 
Sbjct: 409 IGWHPDTEDSANFTEFLTMTRDSNTGKGQYNCGYYSNAEVDKLVNAANEETDLEKRSTML 468

Query: 452 QEVFAKVHDEIVADVPMY 469
           ++V   +++E  A VP++
Sbjct: 469 KKVEEILYNE-AAFVPLH 485