Pairwise Alignments

Query, 502 a.a., peptide ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 526 a.a., putative extracellular solute-binding protein from Phaeobacter inhibens DSM 17395

 Score =  107 bits (267), Expect = 1e-27
 Identities = 117/407 (28%), Positives = 170/407 (41%), Gaps = 57/407 (14%)

Query: 12  LLTATLFSGVAMAAEGE-VKIVLPEQPANLDPCRSIRSDIGRIINSNITETLTVIDTEKG 70
           LLT+  ++G   +AE E +K         LDP  +        +   I E L   D + G
Sbjct: 7   LLTSVFYAGAVCSAEAETLKWARAGDALTLDP-HAQNEGPTITLGRQIMEPLVDRDMKGG 65

Query: 71  TVGPWLAEKWE--QVDDLTWRVHLKSGVKFQDGAAFDAEAVVKSINRLMNPGLTCDSRSK 128
            V P L+ +W   + D   W   L+ GVKF DGA FD+E VV SINR M        +S 
Sbjct: 66  LV-PGLSTEWRPSESDPNVWTFTLRDGVKFHDGADFDSEDVVFSINRAMT------EKSN 118

Query: 129 FGDVKLT---PKAVDAQTVEISSDSPVPIMPTLLGTVQIVSPNMPFDKESNDPV------ 179
           + +V  +    +A     VEI +  P PIMP  L  + I+        E+ND V      
Sbjct: 119 YREVLASVAEVRATGPYRVEIVTKGPNPIMPNNLTNLLIMDKGW---AEANDAVDVQDYE 175

Query: 180 ------------GTGPY-VVESKSNEQIVLKRHDAYWGAKP---DVTRATYVWRSESAIR 223
                       GTGPY VV  + + + VL+R D YWG       VTR         A R
Sbjct: 176 GGESTYAAKNANGTGPYKVVSREPDVKTVLERFDGYWGLGQFPLQVTRIEASPIQNPATR 235

Query: 224 AAMVESGEADMTPSIAVQDATNAESDFAYLNSETTRMRI--------DAQIP-------- 267
            A + SGE D    + VQD +  +        +  + R+        DA +         
Sbjct: 236 VAALLSGEVDFIQDVPVQDLSRVDGSEGLDVRKAPQNRVIFFGMNQGDADLANDNVDGRN 295

Query: 268 PLDDVRIRKALNMAIDWDGMGEALFGKDVLRASQMVVPGVRGHNPDIKPWTYNPEEAMKL 327
           PL DVR+R+A+NMAI+ + + + +       A   + P V G   ++         A K 
Sbjct: 296 PLSDVRVRQAMNMAINREAIQKIVMRGQSEPAGVALPPFVNGWTAELDKVPATDIAAAKA 355

Query: 328 VEEAKAAGAPVDKEIVLIGRNGFFPNSAESLEAMRSMWQEIGLNVSI 374
           + E   AG      I L   N  + N     +A   M+ +IG+NV++
Sbjct: 356 LME--EAGYGDGFSIKLDCPNDRYINDEAICQASVGMFAQIGINVNL 400



 Score = 31.2 bits (69), Expect = 9e-05
 Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 1/62 (1%)

Query: 320 NPEEAMKLVEEAKAAGAPVDKEIVLIGRNGFFPNSAESLEAMRSMWQEIGLNVSIRQLEA 379
           N  E +  V E +A G P   EIV  G N   PN+  +L  M   W E    V ++  E 
Sbjct: 118 NYREVLASVAEVRATG-PYRVEIVTKGPNPIMPNNLTNLLIMDKGWAEANDAVDVQDYEG 176

Query: 380 AD 381
            +
Sbjct: 177 GE 178