Pairwise Alignments

Query, 627 a.a., acetoin catabolism regulatory protein from Sinorhizobium meliloti 1021

Subject, 663 a.a., Sigma-54 dependent transcriptional regulator from Pseudomonas fluorescens FW300-N2E2

 Score =  234 bits (597), Expect = 9e-66
 Identities = 206/650 (31%), Positives = 294/650 (45%), Gaps = 76/650 (11%)

Query: 14  VSRGLPVRRDETVVKSWLRCLEHHRLDPAQSCEAYIVPETRLREHRQQSEDLIAIARSGL 73
           + R   +RR   + +SWLR + H  LDP      ++ P   L E    +  LIA A   +
Sbjct: 44  IERPAGIRR--VIWESWLRSV-HAGLDPEDGEYRFVAPAD-LTETLAANRVLIAAAAQVM 99

Query: 74  ENLFRQVAGQNYVLLLSDREGVTVEFLGDPLFGNSLRKAGLYLGSEWSEWRAGTCAVGAC 133
             L       +  + L+D EG T+ F G  L           +GS   E   GT   G  
Sbjct: 100 RGLLAYNPRGH--INLTDAEGTTLYFCGLDLTP---------IGSRLLESVQGTNCTGLA 148

Query: 134 LETGEALTIHQTDHFDN--THTPLSCTAAPIYDIQGELSAVLDISLLSSPILKASQNLAL 191
           +     + +   ++F        + C AAPI D QG    +L ++         +     
Sbjct: 149 IVEDRLVYVLAEENFGFGLRQRRMHCAAAPIRDAQGRTLGMLTLTAEPGWFHFHTLGTVQ 208

Query: 192 HLVSATVRRIELANLMAQARNQWVLRFSRSPEFLDVDPEAAISIDGLGRIAGMTHAGAKI 251
               A  R++ L  L+ + +             L+V  E  + +D  GRI  + H   ++
Sbjct: 209 AAAEAVSRQMALQALLEEQQT-----------VLEVLNEGLVVLDEQGRIKALNHYARQL 257

Query: 252 LARSTGLDWRDPQQLIGEPVSRFFDIEV---------DNLSDL--TRRRPTRERLV---- 296
                   +R  + L+G P       E+         D + DL  T   P R  L     
Sbjct: 258 --------FRVGRDLLGSPFKSLGQSELTDAVLLAGGDGVRDLDCTFELPDRSHLACLVS 309

Query: 297 ---FARDGNALFAHAIEPHSKVRAPLVSREQIPPALRRLGGDAPVIAALQAKAAKLARTR 353
                + G  +         ++   ++  +        LG    +  AL   A   +R+ 
Sbjct: 310 VCPLEQGGRIVSLRENRRIREITRRIIGTQASYTFETILGRSQAIEDALHL-ARVASRSD 368

Query: 354 LPILIQGETGTGKEHLARAIHEGSG-LEGPFVAINCAAIPEQLIESELFGYLPGAFTGAS 412
              LI GE+GTGKE  A+AIH  S    GPFVA+NC AIP +L++SELFG++ GAFTGA+
Sbjct: 369 STTLILGESGTGKELFAQAIHNASDRCGGPFVAVNCGAIPRELVQSELFGHVEGAFTGAA 428

Query: 413 AKGRKGLIEQADGGTLFLDEIGDMPLALQSRLLRVLAEGEVLPVGGTAPRKVRIRIVSAS 472
             G  G  E ADGGT+FLDEIGDM    Q  LLRVL EGEV  VG     +V +RI++A+
Sbjct: 429 RGGSAGKFELADGGTIFLDEIGDMSFDAQVSLLRVLQEGEVTRVGAKKSLRVNVRIIAAT 488

Query: 473 HRPLQTLVSQGAFREDLYYRLNAATLTLPALR-DRPDFDWVLEQLLKRHG----DGELIL 527
           HR L   V++GAFREDLYYRLN   LT+P LR  R D   +    L R           L
Sbjct: 489 HRNLSQAVAEGAFREDLYYRLNVLNLTVPPLRMRREDVPLLARHFLARCARSLRKSMQDL 548

Query: 528 SPAALSALKAHDWPGNIRELDNVIGVAAALAENGVVELGDLPDQLLAN------------ 575
           SPAAL  L A+ WPGN+REL+NVI  A  LA   ++E  DL  ++               
Sbjct: 549 SPAALDMLGAYHWPGNVRELENVIERATNLAMTELIEPSDLALEIRQRGRPSTWGSAPGP 608

Query: 576 --ADTVGGNEASATLSLTLTACNWNISEAARRLGLDRSTVHRQIKRYRLK 623
             A  +G +E +A ++  L     NI  AA+RL + R  ++ ++ R+ LK
Sbjct: 609 RMAPDLGTHEMNAIIA-ALKDTRGNIRLAAQRLNVSRGGLYNKMSRFGLK 657