Pairwise Alignments

Query, 627 a.a., acetoin catabolism regulatory protein from Sinorhizobium meliloti 1021

Subject, 640 a.a., Sigma-54 dependent transcriptional regulator from Pseudomonas fluorescens FW300-N2E2

 Score =  389 bits (1000), Expect = e-112
 Identities = 241/617 (39%), Positives = 344/617 (55%), Gaps = 23/617 (3%)

Query: 20  VRRDETVVKSWLRCLEHHRLDPAQSCEAYIVPETRLREHRQQSEDLIAIARSGLENLFRQ 79
           +R D  + +SW R +  HRLDP+ S    ++    +R+H+Q+ +  + IA  G+  L R+
Sbjct: 26  IRPDRVIAQSWYRSVIKHRLDPSSSARLDVLCAEDIRQHQQRHQQYLDIASQGVSGLARR 85

Query: 80  VAGQNYVLLLSDREGVTVE--FLGDPLFGNSLRKAGLYLGSEWSEWRAGTCAVGACLETG 137
           V    + +LLSD  G+T++      P+      ++GL +G+ W E  AGT  +G  L   
Sbjct: 86  VVPAGFAVLLSDEHGITLDARLPDQPV---PYVRSGLVVGARWDESIAGTNGIGTTLAAA 142

Query: 138 EALTIHQTDHFDNTHTPLSCTAAPIYDIQGELSAVLDISLLSSPILKASQNLALHLVSAT 197
           E L IH+ +HF  ++  LSC+ API++ QG L   L+ + L+S   K SQ L L LV   
Sbjct: 143 EPLIIHREEHFLTSNARLSCSVAPIFNAQGLLQGCLNATCLNSNGPKESQYLTLQLVILY 202

Query: 198 VRRIELANLMAQARNQWVLRFSRSPEFLDVDPEAAISIDGLGRIAGMTHAGAKILARSTG 257
            R IE A+     R++  L      E  D+  E  +++D  GR+ G  HA      ++ G
Sbjct: 203 ARLIENAHFRQNYRDRLTLSLKPIDEIADLANEQLLALDDSGRVIGANHAAFVAHDQAHG 262

Query: 258 LDWRDPQQLIGEPVSRFFDIEVDNLSDLTRRRPTRERLVFARDGNALFAHAIEPHSKVR- 316
                   L+G P+ +   + V+ L  LT       RL    D   L      P S  R 
Sbjct: 263 ------PHLLGGPIEQLLPMGVNELLRLTNGGARGLRLRARHDEALLDLSLRIPSSDHRL 316

Query: 317 APLVSREQIP--PALRRLGGDAPVIAALQAKAAKLARTRLPILIQGETGTGKEHLARAIH 374
           AP  ++ Q P  P L +L GD P +     +  K+    + ILI GETGTGKE  ARAIH
Sbjct: 317 APAPAKAQRPRHPDLEQLAGDDPTLQQAVRRLHKVIDKDIAILITGETGTGKEAFARAIH 376

Query: 375 EGSGL-EGPFVAINCAAIPEQLIESELFGYLPGAFTGASAKGRKGLIEQADGGTLFLDEI 433
           + S   + PF+A+NCAAIPE LIESELFGY  G+FTGA  KG KG +E A+GGTLFLDEI
Sbjct: 377 QASARRDEPFIALNCAAIPESLIESELFGYRGGSFTGADKKGMKGKLELANGGTLFLDEI 436

Query: 434 GDMPLALQSRLLRVLAEGEVLPVGGTAPRKVRIRIVSASHRPLQTLVSQGAFREDLYYRL 493
           GDMP  LQ+RLLRVLAE E+ P+G   P  + I+++ A+H+ LQ ++    FREDL+YRL
Sbjct: 437 GDMPAHLQTRLLRVLAEREISPIGAPMPVSLDIQVICATHQDLQGMLRDKHFREDLFYRL 496

Query: 494 NAATLTLPALRDRPDFDWVLEQLLKRHGDGELI-LSPAALSALKAHDWPGNIRELDNVIG 552
           N   L+LP LR+R D   ++++LL    + + + L+  A   L    WPGNIR+L N + 
Sbjct: 497 NGMNLSLPPLRERSDRAQLIQRLLDSQAEAKGVQLTAQARQCLLEASWPGNIRQLINALR 556

Query: 553 VAAALAENGVVELGDLPDQLLAN-------ADTVGGNEASATLSLTLTACNWNISEAARR 605
            A A+AE+G V++  LP +LL         + +VG    ++ L   L    WNIS AA  
Sbjct: 557 YAVAMAEDGNVDVDCLPAELLQGDAYARLASPSVGSEPPASNLLEILRRHRWNISAAAAE 616

Query: 606 LGLDRSTVHRQIKRYRL 622
           LG+ RST++RQ+K+ RL
Sbjct: 617 LGVARSTLYRQMKKQRL 633