Pairwise Alignments

Query, 627 a.a., acetoin catabolism regulatory protein from Sinorhizobium meliloti 1021

Subject, 653 a.a., Sigma54 Specific Transcriptional Regulator containing GAF, and Fis DNA-binding domains (NCBI) from Rhodospirillum rubrum S1H

 Score =  326 bits (835), Expect = 2e-93
 Identities = 219/620 (35%), Positives = 317/620 (51%), Gaps = 32/620 (5%)

Query: 25  TVVKSWLRCLEHHRLDPAQSCEAYIVPETRLREHRQQSEDLIAIARSGLENLFRQVAGQN 84
           TV  SW R L    L  +    A  +    L +  ++  +L+  AR  ++ L  Q  G +
Sbjct: 33  TVAHSWERSLRAGLLPFSPPAVADHLAARHLAQAVERRRELLMRARPVMDYLHAQTKGSD 92

Query: 85  YVLLLSDREGVTVEFLGDPLFGNSLRKAGLYLGSEWSEWRAGTCAVGACLETGEALTIHQ 144
            V++L+D  GV +E LGD  F     +  L  G+ W E   GT A+G  L   + + +H 
Sbjct: 93  SVVILADDNGVLIEALGDAAFVERAERVALKPGASWHERHRGTNAIGTALVEAQPVAVHG 152

Query: 145 TDHFDNTHTPLSCTAAPIYDIQGELSAVLDISLLSSPILKASQNLALHLVSATVRRIELA 204
            +HF   +  L+C AAPI    G +  VLDIS    P  +        LV A    IE  
Sbjct: 153 GEHFFEHNRFLTCAAAPIAGPDGRVLGVLDIS---GP-QRGRHPHTFGLVRAATHMIENK 208

Query: 205 NLMAQARNQWVLRFSRSPEFLDVDPEAAISIDGLGRIAGMTHAGAKILARSTGLDWRDPQ 264
              A+   ++ +RF    + +    E  +++   G + G   A    LA +       P 
Sbjct: 209 LFEARHEGEYRIRFHPQADGIGTLAEGMVALSEEGLVIGANRAALAFLAIT-------PS 261

Query: 265 QLIGEPVSRFFDIEVDNLSDLTRRRPTRERLVFARDGNALFAHAIEP--HSKVR-APLVS 321
            +    +     + + ++ D   R P    L  A  G   F+  +EP   + VR A + +
Sbjct: 262 DIGKALIEALLPLRMADILDHGHRHPGTT-LGLACPGGGRFSLRVEPGWRAVVRPAAMPA 320

Query: 322 REQIPPALRRLGGDAPVIAALQAKAAKLARTRLPILIQGETGTGKEHLARAIHEGSGLEG 381
            +++  AL  L    P +A    +  K+    +P+L+QGE+G GKE  A A+H      G
Sbjct: 321 PDRVQDALADLDTGDPTMAGAIERVRKILGKPIPLLLQGESGVGKEVFATALHATGPRRG 380

Query: 382 -PFVAINCAAIPEQLIESELFGYLPGAFTGASAKGRKGLIEQADGGTLFLDEIGDMPLAL 440
            PFVA+NCAA+PE LIE+ELFGY PGAFTGA  +G  G I +A+GGTLFLDEIGDMPLAL
Sbjct: 381 RPFVAVNCAALPEHLIEAELFGYAPGAFTGARREGSAGRIREAEGGTLFLDEIGDMPLAL 440

Query: 441 QSRLLRVLAEGEVLPVGGTAPRKVRIRIVSASHRPLQTLVSQGAFREDLYYRLNAATLTL 500
           Q RLLRVL + +V+P+GG     V   +++ASHRPL+     G FR DLYYRLN  TL L
Sbjct: 441 QCRLLRVLQDRQVVPLGGGKAVSVDFALIAASHRPLKAEAEAGRFRADLYYRLNGLTLCL 500

Query: 501 PALRDRPDFDWVLEQLLKRHGDGELI-LSPAALSALKAHDWPGNIRELDNVIGVAAALAE 559
           P LR R DF  ++ ++++    G  I L P    AL  H WPGN+R+L NV+  A AL +
Sbjct: 501 PPLRARRDFAALVARMIETMEPGAGIGLDPDVADALAGHGWPGNLRQLANVLRFACALRD 560

Query: 560 NGVVELG--DLPDQLL------ANADTVGG-------NEASATLSLTLTACNWNISEAAR 604
            G + LG   LP+ L+      +  DT  G         + + +   + A   N+SEAAR
Sbjct: 561 PGEIRLGWHHLPEDLIEELRCPSGVDTDAGAGPATLRAASDSLIERMVAASGGNLSEAAR 620

Query: 605 RLGLDRSTVHRQIKRYRLKP 624
           RLG+ R+T++R++  +   P
Sbjct: 621 RLGISRNTLYRRMNGWAKPP 640