Pairwise Alignments

Query, 627 a.a., acetoin catabolism regulatory protein from Sinorhizobium meliloti 1021

Subject, 591 a.a., Fis family GAF modulated sigma54 specific transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  303 bits (776), Expect = 1e-86
 Identities = 209/590 (35%), Positives = 304/590 (51%), Gaps = 57/590 (9%)

Query: 55  LREHRQQSEDLIAIARSGLENLFRQVAGQNYV-LLLSDREGVTVEFLGDPLFGNSLRKAG 113
           L E    ++ LI + +     LF Q+   +   L+LSDR+G  +   G   + + L    
Sbjct: 39  LAERHHANKQLINLTKQHALPLFNQMMAHSQSRLILSDRDGYVLCHWGVSRYSDKLANVA 98

Query: 114 LYLGSEWSEWRAGTCAVGACLETGEALTIHQTDHFDNTHTPLSCTAAPIYDIQGELSAVL 173
           L +G  W E   GT A+G  L   + + +    HF   H  +SCTA+PI+  +GEL   +
Sbjct: 99  LDVGVNWREEHKGTNAIGTALTARQTVAVIGEQHFIRHHRFMSCTASPIFSPEGELLGAI 158

Query: 174 DISLLSSPILKASQNLALHLVSATVRRIELANLMAQARNQWVLRFSRSPEFLDVDPEAAI 233
           DI+  S       Q L L  +++ V++IE A L     + + +  +  P  +    +  +
Sbjct: 159 DIT--SEQQRHTQQTLVL--IASLVQQIETALLCHLPGSHYRIDLAEQPSLITSGWQGIV 214

Query: 234 SIDGLGRIAGMTHAGAKILARSTGLDWRDPQQLIGEPVSRFFDIEVDNLSDLT---RRRP 290
             +  G++ G      ++L R            IG+ + R      ++   +    R   
Sbjct: 215 VANVDGKLLGCNAMAKRLLHRPR----------IGDDIDRHLGASWNSGEQVCQDQRLHL 264

Query: 291 TRERLVFARDGNALFAHAIEPHSKVRAPLVSREQIPPALRRLGGDAPVIAALQAKAAKLA 350
             ++LV  R                   LVS +QI    R      P +     +A K+ 
Sbjct: 265 KTQQLVETRPSQ----------------LVS-QQIGVRFRD-----PKLERAWQQANKVV 302

Query: 351 RTRLPILIQGETGTGKEHLARAIH-EGSGLEGPFVAINCAAIPEQLIESELFGYLPGAFT 409
              +P+LI GETG GKE   + +H + +  + P VA+NCAA+P +L+ESELFGY  GAFT
Sbjct: 303 GRNIPLLICGETGVGKEQFVKKLHGQSTRAQRPLVAVNCAALPAELVESELFGYQAGAFT 362

Query: 410 GASAKGRKGLIEQADGGTLFLDEIGDMPLALQSRLLRVLAEGEVLPVGGTAPRKVRIRIV 469
           GAS +G +G I QADGG LFLDEIG+MPLA QSRLLRVL E EV+PVGG    KV I++V
Sbjct: 363 GASRQGFEGKIRQADGGFLFLDEIGEMPLATQSRLLRVLQEREVVPVGGNRSYKVDIQVV 422

Query: 470 SASHRPLQTLVSQGAFREDLYYRLNAATLTLPALRDRPDFDWVLEQLLKRHGDGELILSP 529
           +A+H  L+ LVS+GAFREDLYYRLN   ++LP LR R D + ++ +L +R+      L P
Sbjct: 423 AATHADLRQLVSEGAFREDLYYRLNGLQVSLPPLRQRADIERIIHKLHRRYRQAPQQLCP 482

Query: 530 AALSALKAHDWPGNIRELDNVIGVAAALAENGVVELG--DLPDQL---LANADTVGGNEA 584
             L  L AHDWPGN+RELDN++ VA  +A+ G  EL    LPD L   L   +  G   A
Sbjct: 483 QLLRRLLAHDWPGNLRELDNLMQVACLMAD-GDPELNWQHLPDTLQAQLQGPEQAGEQMA 541

Query: 585 SATLSLTLTA----------CNWNISEAARRLGLDRSTVHRQIKRYRLKP 624
           +    L+L               N+S  A+ LG+ R+T++R++K   LKP
Sbjct: 542 ACESELSLMVNANIVSSFHRFEGNVSRCAKHLGISRNTLYRKLKALGLKP 591