Pairwise Alignments

Query, 627 a.a., acetoin catabolism regulatory protein from Sinorhizobium meliloti 1021

Subject, 628 a.a., Fis family GAF modulated sigma54 specific transcriptional regulator (RefSeq) from Shewanella sp. ANA-3

 Score =  305 bits (781), Expect = 4e-87
 Identities = 217/632 (34%), Positives = 327/632 (51%), Gaps = 67/632 (10%)

Query: 29  SWLRCLEHHRLDPAQSCEAYIVPETRLREHRQQSEDLIAIARSGLENLFRQV-AGQNYVL 87
           SW R L    L   ++ E   +  + L+   +Q + LI + +S    LF Q+ A  N  L
Sbjct: 26  SWQRSLGAG-LSEFRAGEDLRLTRSELKYKHEQYQQLIELVQSHALPLFNQLMAHSNSRL 84

Query: 88  LLSDREGVTVEFLGDPLFGNSLRKAGLYLGSEWSEWRAGTCAVGACLETGEALTIHQTDH 147
           LLSD +G  ++  G   + + L    L +G  W E   GT A+G  L   +A+++    H
Sbjct: 85  LLSDADGYVLKHWGVSRYSSKLADVALDIGVNWLEKYKGTNAIGTALTAKQAVSVVGEQH 144

Query: 148 FDNTHTPLSCTAAPIYDIQGELSAVLDISLLSSPILKASQNLALHLVSATVRRIELANLM 207
           F   +  +SCTA PI+  QGE+  VLDI+   S   + SQ   L LVS+  +++E A L 
Sbjct: 145 FIRQNRFMSCTACPIFSPQGEMLGVLDIT---SEQQRHSQQ-TLMLVSSLAQQVETALLC 200

Query: 208 AQARNQWVLRFSRSPEFLDVDPEAAISIDGLGRIAGMTHAGAKILARSTGLDWRDPQQLI 267
               + + + F+  P  L+   +  +     GRI G      ++L+++   D  D  Q +
Sbjct: 201 HLPDSHYRIDFAAQPSLLNSGWQGIVIASSDGRIVGCNPMAKQLLSQAKLGDSLD--QHL 258

Query: 268 GEPVSRFFDIEVDNLSDLTRRRPTRERLVFARDGNALFAHAIEPHSKVRAPLVSREQIPP 327
           G+  +R      D+   +  +                 A A+      R       Q  P
Sbjct: 259 GDNWARAGGFHRDSALHVQTQ-----------------ALALTQTKSTRTL-----QDKP 296

Query: 328 ALRRLGGDA--PVIAALQAKAAKLARTRLPILIQGETGTGKEHLARAIHEGSGLEG-PFV 384
            L +LG     P++     +A K+   ++P+L+ GETG GKE   + +H  S     P V
Sbjct: 297 -LNQLGVRFRDPLLERAWQQANKVITKQIPLLVLGETGVGKEQFVKKLHAQSTRRAQPIV 355

Query: 385 AINCAAIPEQLIESELFGYLPGAFTGASAKGRKGLIEQADGGTLFLDEIGDMPLALQSRL 444
           A+NCAA+P +L+ESELFGY  GAFTGA+  G  G I QA GG LFLDEIG+MPLA QSRL
Sbjct: 356 AVNCAALPAELVESELFGYQAGAFTGANRTGFIGKIRQAHGGFLFLDEIGEMPLAAQSRL 415

Query: 445 LRVLAEGEVLPVGGTAPRKVRIRIVSASHRPLQTLVSQGAFREDLYYRLNAATLTLPALR 504
           LRVL E EV+PVG     KV I+I++A+H  L++LV+QG FR+DL+YRLN   + LPALR
Sbjct: 416 LRVLQEREVVPVGSNQSFKVDIQIIAATHMDLESLVAQGLFRQDLFYRLNGLQVRLPALR 475

Query: 505 DRPDFDWVLEQLLKRHGDGELILSPAALSALKAHDWPGNIRELDNVIGVAAALAE-NGVV 563
           +R D + ++ +L +RH      L    L+ L  +DWPGN+RELDN++ VA  +AE   V+
Sbjct: 476 ERQDIERIIHKLHRRHRSSAQTLCTELLAQLMRYDWPGNLRELDNLMQVACLMAEGEAVL 535

Query: 564 ELGDLPDQL----------------------------LANADTVGGNEASATLSLTL--- 592
           E+  LPD L                            L  + +V  +    T++L +   
Sbjct: 536 EINHLPDYLAQKLMNLACEPQTLTEVADAEATAHPHELVESSSVTIDSLHGTINLNVLQA 595

Query: 593 -TACNWNISEAARRLGLDRSTVHRQIKRYRLK 623
             AC+ N+S+ A+RLG+ R+ ++R++K+  +K
Sbjct: 596 YRACDGNVSQCAKRLGISRNALYRKLKQLGIK 627