Pairwise Alignments

Query, 398 a.a., ISRm5 transposase from Sinorhizobium meliloti 1021

Subject, 409 a.a., Probable transposase from Mycobacterium tuberculosis H37Rv

 Score =  245 bits (625), Expect = 2e-69
 Identities = 141/361 (39%), Positives = 205/361 (56%), Gaps = 3/361 (0%)

Query: 22  DGLREVIRTVMQEVLEAEMDEALGAAKGERTPERLGYRSGHYGRTLITRVGKLELRVPQD 81
           D +R+ +R V+QE+ E E  E +GAA+ ER+  R+  R+G   R L T+ G +ELR+P+ 
Sbjct: 22  DLIRDAVRLVLQELSELEATERIGAARYERSDTRVTDRNGARSRVLSTQAGDVELRIPKL 81

Query: 82  RSGHFSTELFERYQRSERALVATLAEMYVQGVSTRKVKAITEEL-CGHAFSASSISAINK 140
           R G F   + E  +R ++AL A + E YV G+STR V  + E +      S S +S I  
Sbjct: 82  RKGSFFPAILEPRRRIDQALYAVVMEAYVHGISTRAVDDLVEAMGVETGISKSEVSRICA 141

Query: 141 RLDESLKAFAERSLQE-PFAYLILDARYEKVREA-GVVMSQAVLIAVGIDWDGRRQILSV 198
            LDE + AF  R+L    F Y+ LDA Y  VR   G V+S AV++A GI  DG R+IL +
Sbjct: 142 GLDEIVGAFRTRTLGHIEFPYVYLDATYLNVRNGTGQVVSMAVIVASGIAADGSREILGL 201

Query: 199 EMAGRESRSAWKDFLVRLKGRGLKGVELVVSDDHAGLVAAIGEVIPEAVWQRCYVHFLRN 258
           ++   E  + W+ FL  LKGRGL GV LV+SD HAGLV A+      A  QRC VHF RN
Sbjct: 202 DVGDSEDETFWRGFLTSLKGRGLGGVRLVISDQHAGLVKALKRCFQGAGHQRCRVHFARN 261

Query: 259 ALDHLPRKHGDDCLQELRWLYDRRDLDEAKADLAAWLGKWSVRYPRLTSWVEETIEQTLT 318
            L H+P+   D      R ++   D +   A       + +  +P++   +++   + L 
Sbjct: 262 LLAHVPKDKADMVASMFRMIFSAPDAEAVHATWEGVRDRLAASFPKIGPLMDDARAEVLA 321

Query: 319 FFRLPRQHHKHLKSTNMLERLNEEIRRRTYVVRIFPNTESCLRLVRALAVETHENWMEAN 378
           F   P+ H + + STN LER+N+EI+RR+ VV IFPN  + +RLV A+  + H+ W  + 
Sbjct: 322 FTAFPKAHWQKIWSTNPLERINKEIKRRSRVVGIFPNPAAVIRLVGAVLADMHDEWQASE 381

Query: 379 R 379
           R
Sbjct: 382 R 382