Pairwise Alignments

Query, 398 a.a., ISRm5 transposase from Sinorhizobium meliloti 1021

Subject, 415 a.a., Probable transposase from Mycobacterium tuberculosis H37Rv

 Score =  239 bits (611), Expect = 8e-68
 Identities = 139/370 (37%), Positives = 205/370 (55%), Gaps = 2/370 (0%)

Query: 19  SNPDGLREVIRTVMQEVLEAEMDEALGAAKGERTPERLGYRSGHYGRTLITRVGKLELRV 78
           ++PD LR ++ T +  ++ AE D   GA   ER+ ER   R+G+  R   TR   +++ +
Sbjct: 20  ASPDLLRGLLSTFIAALMGAEADALCGAGYRERSDERSNQRNGYRHRDFDTRAATIDVAI 79

Query: 79  PQDRSG-HFSTELFERYQRSERALVATLAEMYVQGVSTRKVKAITEELCGHAFSASSISA 137
           P+ R G +F   L +R +R+ERAL + +A  Y+ GVSTR+++ + E L     S S +S 
Sbjct: 80  PKLRQGSYFPDWLLQRRKRAERALTSVVATCYLLGVSTRRMERLVETLGVTKLSKSQVSI 139

Query: 138 INKRLDESLKAFAERSLQE-PFAYLILDARYEKVREAGVVMSQAVLIAVGIDWDGRRQIL 196
           + K LDE+++AF  R L   P+ +L  DA   KVREAG V+    LIA G++ +G R+IL
Sbjct: 140 MAKELDEAVEAFRTRPLDAGPYTFLAADALVLKVREAGRVVGVHTLIATGVNAEGYREIL 199

Query: 197 SVEMAGRESRSAWKDFLVRLKGRGLKGVELVVSDDHAGLVAAIGEVIPEAVWQRCYVHFL 256
            +++   E  + W  F   L  RGL GV LV SD HAGLVAAIG  +P A WQRC  H+ 
Sbjct: 200 GIQVTSAEDGAGWLAFFRDLVARGLSGVALVTSDAHAGLVAAIGATLPAAAWQRCRTHYA 259

Query: 257 RNALDHLPRKHGDDCLQELRWLYDRRDLDEAKADLAAWLGKWSVRYPRLTSWVEETIEQT 316
            N +   P+         L  +YD+ D +   A     L   + + P +   ++      
Sbjct: 260 ANLMAATPKPSWPWVRTLLHSIYDQPDAESVVAQYDRVLDALTDKLPAVAEHLDTARTDL 319

Query: 317 LTFFRLPRQHHKHLKSTNMLERLNEEIRRRTYVVRIFPNTESCLRLVRALAVETHENWME 376
           L F   P+Q  + + S N  ERLN E+RRRT VV IFP+  S +RLV A+  E H+ W+E
Sbjct: 320 LAFTAFPKQIWRQIWSNNPQERLNREVRRRTDVVGIFPDRASIIRLVGAVLAEQHDEWIE 379

Query: 377 ANRYINMDDL 386
             RY+ ++ L
Sbjct: 380 GRRYLGLEVL 389