Pairwise Alignments

Query, 398 a.a., ISRm5 transposase from Sinorhizobium meliloti 1021

Subject, 439 a.a., Probable transposase from Mycobacterium tuberculosis H37Rv

 Score =  155 bits (391), Expect = 3e-42
 Identities = 103/356 (28%), Positives = 178/356 (50%), Gaps = 6/356 (1%)

Query: 11  AAVKDILLSNPDGLREVI-RTVMQEVLEAEMDEALGAAKGERTPERLGY-RSGHYGRTLI 68
           A  + + L+ PDGL + + +TV++  L+ EM E LG  +        G  R+G   + +I
Sbjct: 41  ARAEGVALTGPDGLLKALTKTVLEAALQEEMTEHLGYDRHAAAGRGSGNSRNGSRNKKVI 100

Query: 69  TRV-GKLELRVPQDRSGHFSTELFERYQRSERALVATLAEMYVQGVSTRKVKAITEELCG 127
           T   G++E+ VP+DR+G F   +  + +R    +   +  +Y +G++T ++ A   ++ G
Sbjct: 101 TDACGQVEIAVPRDRNGTFEPVIVGKRKRRVTDVDRVVLSLYAKGLTTGEIAAHFADVYG 160

Query: 128 HAFSASSISAINKRLDESLKAFAERSLQEPFAYLILDARYEKVREAGVVMSQAVLIAVGI 187
            + S  +IS I  R+ E ++A+  R L++ +A + +DA   K+R+ G V ++ V  A+G+
Sbjct: 161 VSVSKDTISRITDRVIEEMQAWWSRPLEKVYAAVFIDAIMVKIRD-GQVRNRPVYAAIGV 219

Query: 188 DWDGRRQILSVEMAGRESRSA--WKDFLVRLKGRGLKGVELVVSDDHAGLVAAIGEVIPE 245
           D DG + IL +     +  SA  W   L  L+ RG+K +  +V D   GL  ++    P 
Sbjct: 220 DLDGHKDILGMWAGEGDGESAKFWLAVLTDLRNRGVKDIFFLVCDGLKGLPDSVSAAFPL 279

Query: 246 AVWQRCYVHFLRNALDHLPRKHGDDCLQELRWLYDRRDLDEAKADLAAWLGKWSVRYPRL 305
           A  Q C +H +RN   +  RK+ D    +L+ +Y      EA+     +  KW   YP +
Sbjct: 280 ATVQTCIIHLIRNTFRYASRKYWDKISVDLKPIYTAASAAEARLRYEEFAEKWGKPYPAI 339

Query: 306 TSWVEETIEQTLTFFRLPRQHHKHLKSTNMLERLNEEIRRRTYVVRIFPNTESCLR 361
           T   +   E+ + F     +  +   STN +E LN   RR       FPN +S L+
Sbjct: 340 TRLWDSAWEEFIPFLDYDVEIRRVPCSTNAIESLNARYRRAVRARGHFPNEQSALK 395