Pairwise Alignments

Query, 398 a.a., ISRm5 transposase from Sinorhizobium meliloti 1021

Subject, 401 a.a., ISSod5, transposase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  144 bits (363), Expect = 5e-39
 Identities = 93/363 (25%), Positives = 179/363 (49%), Gaps = 16/363 (4%)

Query: 18  LSNPDG-LREVIRTVMQEVLEAEMDEALGAAKGERTPERLGYRSGHYGRTLITRVGKLEL 76
           L+  DG L  +I+ + +  L AE+D  L + +G         ++G   +T+ + +G  EL
Sbjct: 21  LTGKDGILTPLIKQLTEAALAAELDSHLTSTEGANR------KNGKTTKTIKSPLGNFEL 74

Query: 77  RVPQDRSGHFSTELFERYQRS-----ERALVATLAEMYVQGVSTRKVKAITEELCGHAFS 131
             P+DR+G F  +L +++Q       ER ++     ++  G S + ++A  E++ G + S
Sbjct: 75  NTPRDRAGTFEPQLVKKHQTQLTDEMERKIIG----LFSLGSSYQDIRAHIEDMYGMSVS 130

Query: 132 ASSISAINKRLDESLKAFAERSLQEPFAYLILDARYEKVREAGVVMSQAVLIAVGIDWDG 191
             +++AI  +L   L+A+ ER L+  +  + LDA + K++E G  +S+AV   + ++ DG
Sbjct: 131 NGTVNAITDKLLPELQAWRERELEPLYPVIWLDAIHYKIKENGRFISKAVYTILALNVDG 190

Query: 192 RRQILSVEMAGRESRSAWKDFLVRLKGRGLKGVELVVSDDHAGLVAAIGEVIPEAVWQRC 251
           ++++L + ++  E    W   L  L  RG+K + +   D   G   AI  + P+   Q C
Sbjct: 191 KKELLGLYLSDNEGAHHWLSVLTDLYNRGVKDILIACVDGLKGFPEAIATIYPQTEVQLC 250

Query: 252 YVHFLRNALDHLPRKHGDDCLQELRWLYDRRDLDEAKADLAAWLGKWSVRYPRLTSWVEE 311
            +H +RN++ ++  KH    + +L+ +Y    L+ A+  L     KW  +YP +      
Sbjct: 251 VIHQIRNSIKYVASKHQKAFMADLKCVYKAATLNAAEMALDELETKWGDKYPVVIKSWRN 310

Query: 312 TIEQTLTFFRLPRQHHKHLKSTNMLERLNEEIRRRTYVVRIFPNTESCLRLVRALAVETH 371
                  +F+ P      + +TN +E ++ + R+       F N  S L+L+ A  ++  
Sbjct: 311 KWALLSVYFKYPDYVRTAIYTTNAVEAVHRQFRKLAKTKGGFANENSLLKLLYAGILKAS 370

Query: 372 ENW 374
           E W
Sbjct: 371 ERW 373