Pairwise Alignments

Query, 398 a.a., ISRm5 transposase from Sinorhizobium meliloti 1021

Subject, 400 a.a., ISSod4, transposase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  141 bits (355), Expect = 4e-38
 Identities = 91/357 (25%), Positives = 172/357 (48%), Gaps = 17/357 (4%)

Query: 24  LREVIRTVMQEVLEAEMDEALGA-----AKGERTPERLGYRSGHYGRTLITRVGKLELRV 78
           L  +I+ + +  L+AE+++ L        K  +TP+ + + SG++           EL  
Sbjct: 27  LGPLIKQLTEAALQAELEQHLAHDPQANRKNGKTPKTIKHPSGNF-----------ELDA 75

Query: 79  PQDRSGHFSTELFERYQRS-ERALVATLAEMYVQGVSTRKVKAITEELCGHAFSASSISA 137
           P+DR+G F  +L ++ Q +    +   +  M+  G+S R +    E++ G   S +++SA
Sbjct: 76  PRDRNGTFEPQLIKKNQTTLTDEIERKVLSMFSIGMSYRDINQHVEDMYGLNVSNATVSA 135

Query: 138 INKRLDESLKAFAERSLQEPFAYLILDARYEKVREAGVVMSQAVLIAVGIDWDGRRQILS 197
           I  +L   LKA+ +R L   +  + LDA + KV+E G  +S+AV   + ++  G+++IL 
Sbjct: 136 ITDKLIPELKAWQQRPLDSHYPIVWLDAIHYKVKEDGRYVSKAVYTLLALNMKGKKEILG 195

Query: 198 VEMAGRESRSAWKDFLVRLKGRGLKGVELVVSDDHAGLVAAIGEVIPEAVWQRCYVHFLR 257
           + ++  E  + W   L  L  RG+K + +   D   G   AI  + P    Q C +H +R
Sbjct: 196 LHLSENEGANYWLSVLTDLNNRGVKDILIACVDGLTGFPEAIASIFPHTETQLCVIHQIR 255

Query: 258 NALDHLPRKHGDDCLQELRWLYDRRDLDEAKADLAAWLGKWSVRYPRLTSWVEETIEQTL 317
           N++ ++  K+    + +L+ +Y     + A+  L     KW   YP + +          
Sbjct: 256 NSMKYVASKNQKAFMADLKPVYRAVSKEAAEMALDELEAKWGDAYPLVINSWRRKWHNLS 315

Query: 318 TFFRLPRQHHKHLKSTNMLERLNEEIRRRTYVVRIFPNTESCLRLVRALAVETHENW 374
            +F+ P    K + +TN +E ++ + R+ T     FPN  S L+L+ A  +   + W
Sbjct: 316 HYFKYPEHIRKVIYTTNAVEAVHRQFRKLTKTKGAFPNENSLLKLLYAGILNASDKW 372