Pairwise Alignments

Query, 398 a.a., ISRm5 transposase from Sinorhizobium meliloti 1021

Subject, 403 a.a., transposase, mutator family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  157 bits (397), Expect = 5e-43
 Identities = 98/359 (27%), Positives = 180/359 (50%), Gaps = 1/359 (0%)

Query: 17  LLSNPDGLREVIRTVMQEVLEAEMDEALGAAKGERTPERLGY-RSGHYGRTLITRVGKLE 75
           LL     LR++ + + +  LEAEM+  LG AK +      G  R+G   +++ +  G +E
Sbjct: 21  LLGEQGILRQLTKKLAERALEAEMELHLGYAKHDAAGFNTGNSRNGKSRKSVRSIHGDIE 80

Query: 76  LRVPQDRSGHFSTELFERYQRSERALVATLAEMYVQGVSTRKVKAITEELCGHAFSASSI 135
           L  P+DR+G F  +L ++ ++        +  +Y +G+STR ++A  EE  G   S + I
Sbjct: 81  LETPRDRNGSFEPKLIKKGEKQLGGFDERIVSLYARGMSTRDIQAHFEETYGVEVSPTFI 140

Query: 136 SAINKRLDESLKAFAERSLQEPFAYLILDARYEKVREAGVVMSQAVLIAVGIDWDGRRQI 195
           S I   + + +KA+  R L   +  + LD    + R++G + +++V +A+G++ DG +++
Sbjct: 141 SQITNAVLDEVKAWQLRPLAPVYPIVYLDCLVVRSRDSGSIQNKSVYLALGVNTDGEKEL 200

Query: 196 LSVEMAGRESRSAWKDFLVRLKGRGLKGVELVVSDDHAGLVAAIGEVIPEAVWQRCYVHF 255
           L + +A  E    W   +  LK RG++ + +   D   G   AI  V P+   Q C VH 
Sbjct: 201 LGLWIAQTEGAKFWLSVMNELKNRGVEDIFIACVDGLKGFPDAIEAVYPKTQVQLCIVHQ 260

Query: 256 LRNALDHLPRKHGDDCLQELRWLYDRRDLDEAKADLAAWLGKWSVRYPRLTSWVEETIEQ 315
           +RN+L  +  K       +L+ +Y    L +A+  L  +   W  ++P ++    E   +
Sbjct: 261 IRNSLRFVSWKERKAVAADLKTIYGAATLQQAELALEQFAKTWDKQHPSISKSWRENWTR 320

Query: 316 TLTFFRLPRQHHKHLKSTNMLERLNEEIRRRTYVVRIFPNTESCLRLVRALAVETHENW 374
              FF  P +  K + +TN +E LN  +R+ T   R FP+ ++ L+L+     +  + W
Sbjct: 321 LSVFFDYPPEIRKVIYTTNAIESLNASLRQVTKTRRSFPSDDAVLKLLYLALHQIAKKW 379