Pairwise Alignments

Query, 355 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 276 a.a., cobalamin-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score = 52.8 bits (125), Expect = 1e-11
 Identities = 64/288 (22%), Positives = 115/288 (39%), Gaps = 60/288 (20%)

Query: 53  RTVSIGQSSTEILYLLGLADKVAGTALWVGPVLEGYEEVNAKVERLADNDP-SFESVLAK 111
           R +S+   +TEI Y  GL DK+   + +       Y     ++ER+A++   + E +L  
Sbjct: 27  RIISLAPHATEIAYAAGLGDKLVAVSEY-----SDYPPQALELERVANHQTINIEKILTL 81

Query: 112 KPDMVAVQFQWQVG-PEGVVARPEQFEELGIPVYTSPSDCTGKENSAASDGVRRQVFTMD 170
           KPD++     W  G P   +A+     +LG  +Y S                  Q  T+D
Sbjct: 82  KPDLI---IAWPAGNPPRELAK---LRQLGFTIYDS------------------QTKTLD 117

Query: 171 LVYREIRELAHIYNVQDKGEKVVAELKSREEAARAKVASAGDKLSAVFWFSSAADADPYV 230
            +   I  L+H     + G+K   + + R +  R + AS       + +F   ++     
Sbjct: 118 EIADNIEALSHYSANPEVGQKAAHDFRQRLQDLRTQYASN----QPIRYFYQLSEKPIIT 173

Query: 231 AGRNGAPGYIMAALGIENII-DTEDEWPTVGWETIAKAEPTMI------VAGSMERRRYP 283
             +   P  + +  G  NI  D+E  +P V  E +   +P +I      +A     R + 
Sbjct: 174 LAQGHWPSEVFSLCGGVNIFADSEVPYPQVSIEQVLVKQPQVIFTSEHAIANGHMWRAWQ 233

Query: 284 LDSLDAKLEFLKTDPVASLMPAVAKGYVFAMDAQAMN-PTIRTIEGIE 330
            +                 + AV    V+A++A  +N PT RT++ +E
Sbjct: 234 AE-----------------LSAVQNDQVWALNADWLNRPTPRTLDAVE 264