Pairwise Alignments

Query, 329 a.a., transcriptional regulator from Sinorhizobium meliloti 1021

Subject, 319 a.a., Transcriptional regulator, AraC family from Pseudomonas fluorescens FW300-N2E2

 Score =  154 bits (390), Expect = 2e-42
 Identities = 88/220 (40%), Positives = 118/220 (53%), Gaps = 4/220 (1%)

Query: 106 HAKGATLASTCGGTFVLAATGLLKGRPATTHWLFANAFRDRFPDVRLDPDKIVIEDGDII 165
           HA+GA L S C G FVLAA GLL G  ATTHW + +     FP VR+DPD + ++ G +I
Sbjct: 99  HARGARLLSICSGAFVLAAAGLLDGLGATTHWRYTDELAASFPAVRVDPDVLYVDSGQVI 158

Query: 166 TAGGLMAWTDLGMRLVDRLFGPTVTVETGRFLLIDP--AGREQRHYSSFSPRLNHGDEAI 223
           T+ G  A  D  + LV R +G  V     R L++ P   G + +   S   R    D  +
Sbjct: 159 TSAGSAAGIDACLHLVARDYGVQVANAVARRLVMSPQRTGGQAQFIPSPVSRTPRSD--L 216

Query: 224 LKVQHWLQTREARAVSVAEMAKVVAMEDRTFLRRFKAATGMKPIEYAQHLRVGKARELLE 283
             V  W + R    + V E+A   AM +RTFLR F  A G+ P  + QH R+ +ARELLE
Sbjct: 217 SSVMQWARERLHEPLGVRELASQAAMSERTFLRHFTQACGVSPKTWLQHERLARARELLE 276

Query: 284 FTKRSVEQIAWSVGYEDAAAFRKLFHRIVGLSPGDYRHRF 323
            +  + + IA   GY    +FR  F  +VGL+P  YR RF
Sbjct: 277 SSGDNTDNIAQLCGYRSVESFRVAFRNVVGLAPSVYRERF 316



 Score = 30.4 bits (67), Expect = 6e-05
 Identities = 25/92 (27%), Positives = 40/92 (43%), Gaps = 20/92 (21%)

Query: 157 IVIEDGDIITAGGLMAWTDLGMRLVDRLFGPTVTVETGRFLLIDPAGREQRHYSSFSPRL 216
           + ++DG +   GG     D GM L          +ET R +++ P  R +R   S     
Sbjct: 45  VAVDDGPMRAMGGFQVLADGGMEL----------LETARTIVV-PGWRNRREPPS----- 88

Query: 217 NHGDEAILKVQHWLQTREARAVSVAEMAKVVA 248
               +A+L+  H    R AR +S+   A V+A
Sbjct: 89  ----QALLEALHRAHARGARLLSICSGAFVLA 116