Pairwise Alignments

Query, 329 a.a., transcriptional regulator from Sinorhizobium meliloti 1021

Subject, 342 a.a., AraC family transcriptional regulator (RefSeq) from Shewanella amazonensis SB2B

 Score =  144 bits (363), Expect = 3e-39
 Identities = 83/216 (38%), Positives = 115/216 (53%), Gaps = 1/216 (0%)

Query: 109 GATLASTCGGTFVLAATGLLKGRPATTHWLFANAFRDRFPDVRLDPDKIVIEDGDIITAG 168
           G  +A+ C G F+LAATGLL GR ATT W  A  F   FP+VRL    +V  DG   TAG
Sbjct: 118 GVPVAACCAGAFLLAATGLLDGRKATTAWWLAPLFEQHFPEVRLSMVSLVERDGLFFTAG 177

Query: 169 GLMAWTDLGMRLVDRLFGPTVTVETGRFLLIDPAGREQRHYSSFSP-RLNHGDEAILKVQ 227
              A   LG+ L+++L          +  LIDP    QR +    P +  H D  +  + 
Sbjct: 178 ASTASYSLGLALLEQLVDEHFAQAMAKVFLIDPNRSSQRVFMDQVPLQPLHTDPQVADIM 237

Query: 228 HWLQTREARAVSVAEMAKVVAMEDRTFLRRFKAATGMKPIEYAQHLRVGKARELLEFTKR 287
            W+       +++  +A+  AM  RT +RRFKAA    P  Y Q LR+ +A+ LLE T  
Sbjct: 238 RWISNNLTEDLALESLAERFAMGKRTLIRRFKAALHDTPSSYIQKLRIDRAKRLLERTDL 297

Query: 288 SVEQIAWSVGYEDAAAFRKLFHRIVGLSPGDYRHRF 323
            +E+I   +GYED ++FRKLF +   L+P  YR +F
Sbjct: 298 PLERILPELGYEDVSSFRKLFIQHTSLTPKAYREKF 333