Pairwise Alignments

Query, 426 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 427 a.a., TRAP dicarboxylate transporter, DctM subunit (NCBI) from Rhodospirillum rubrum S1H

 Score =  239 bits (610), Expect = 1e-67
 Identities = 140/421 (33%), Positives = 236/421 (56%), Gaps = 13/421 (3%)

Query: 2   TISIFLGALLGPMALGVPIAFALILSGVALML--YLGLFDAQIVAQNVLNGADSFPLMAV 59
           T+S+F    LG   LG P+A AL L+G   +L   LG+     V   V  G   +PL+A+
Sbjct: 3   TLSLF-AVFLGLTLLGAPLAVALGLAGSVAILEAQLGILS---VPTTVYAGIAKYPLLAI 58

Query: 60  PFFLLAGEVMNTGGLSRRIVALAMAMVGHIRGGLGFVAIFAACILSSLSGSAVADAAALG 119
           P F+LAG +    G++R++V+ A ++VG   GGL  VA+    ++  +SGS  ADAAA+ 
Sbjct: 59  PVFILAGLIFERVGVARQLVSFASSIVGARNGGLAIVAVLVCMVMGGISGSGPADAAAVA 118

Query: 120 ALLLPMMLKSGHDPARASGLIASASIIGPIIPPSIGFILFGV-VGGVSITKLFLAGIFPG 178
            +++P + K+G+  A ++ +IA+ +    +IPPS+ FI++ V V   S+  LF  G+ PG
Sbjct: 119 TVMIPSLHKAGYPKAFSASVIAAGAATAILIPPSVAFIIYSVLVPQASVPALFAGGLIPG 178

Query: 179 LMIAAALSITWLIVARKEQFELP---PRQSGRLRLRAFVDSLWALFLPVIIIAGLKFGVF 235
           L+   +L    + ++R+  F +    PR    + L+    ++W L  PVII+ GL+ G+F
Sbjct: 179 LLAGLSLLAPIVYLSRRHGFGMADSGPRPGFWVSLKG---AIWGLLAPVIILGGLRLGLF 235

Query: 236 TPTEAGVIAAVYSLFVSMVVYRELAPAQLFHVFVSAAKISAVVMFLVACAAVSAWLITVA 295
           TPTEA V+A  Y LFV + + R L+   L  +   AA++S VV+ ++A A+V AW  +  
Sbjct: 236 TPTEAAVVAVFYGLFVGVFILRTLSGRMLIDMLADAAEMSGVVLLIIALASVFAWAGSTL 295

Query: 296 DVPGALAALLEPLMGNQTALLIAIMVLIVIVGTAMDMTPTILIMTPVLMPVIKQAGIDPV 355
               A+A        N+  +L+ + +L++ +G  +D     LI+ P+L+P ++    DPV
Sbjct: 296 GAFDAVAGAALQATDNEVVVLLMLNLLLLGLGMVLDAVSIFLILLPLLVPFMEAFHWDPV 355

Query: 356 YFGVLFIINNSIGLITPPVGTVLNVICGVSKLSMEDLMKGVMPFLFAELIVLFLLVLFPE 415
           +FGV+  +N ++G  TPP+   L V   ++ + ME      + F+ A ++ L ++   PE
Sbjct: 356 WFGVMVTMNLAVGQFTPPMAVNLMVTTRIAGVRMEAATGWTLWFVGAMIVALMVVTFVPE 415

Query: 416 L 416
           L
Sbjct: 416 L 416