Pairwise Alignments

Query, 355 a.a., ATP-dependent DNA ligase from Sinorhizobium meliloti 1021

Subject, 866 a.a., ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module from Pseudomonas syringae pv. syringae B728a

 Score = 69.7 bits (169), Expect = 3e-16
 Identities = 91/360 (25%), Positives = 138/360 (38%), Gaps = 29/360 (8%)

Query: 2   ASSAHGKPTKKAAPSSAAKKAGGFPLPVSTAPMEARSATELPGGDAWQYEPKWDGFRCLA 61
           A+ A  K +  AA  +  K    F   + T   +  +  E P    W YE K+DG+R L 
Sbjct: 210 ATPAAAKASMPAAKPARRKAKSAF---LDTLAPQLATLVEAPPAGDWLYEIKFDGYRMLT 266

Query: 62  FKSGDEVDIRAKSGKPLGRFFPEIVALLRRLEPDMFVLDGELVI-EVDGRLSFDALQMRL 120
              GD+V +  ++G       PE+V  L+ ++      DGE+V+ +  G   F  LQ   
Sbjct: 267 RIQGDDVRLFTRNGHDWTERLPELVKALKGMKLRDSWFDGEVVVLDEQGLPDFQGLQNAF 326

Query: 121 HPAASRVQKLSQETPAKLILFDM--LAGTDGTILTGEPLQTRRACLEAFAKKNAVAEMLE 178
               S+             LFDM  L+  D   L   PL+ RR  L+          +  
Sbjct: 327 DAGNSK--------DILYYLFDMPFLSAED---LREVPLEQRRDALKQVLDAQKSRLLRY 375

Query: 179 SSPFTLDIKEAERWLTSWEAGATDGVVAKRRDGVYECGERA-MVKVK-RLKTADCVVGGF 236
           S  F    ++    + S  A   +GV+ KR    Y     A  +K+K RL+    VVG  
Sbjct: 376 SDAFQAGHQDI---VASAAAMGLEGVIGKRAGSAYVSKRNADWIKLKCRLRQEFVVVGYT 432

Query: 237 RYESDSSLVGSLLLGLYDTEGLLNHVGFTAT-ISDKERPALTNQLEALREPPGFTGKAPG 295
             +   S  G+LLL +   E  L + G   T  ++     L  QL+ L+       K   
Sbjct: 433 APQGSRSAFGALLLAVNAGEDGLIYAGRVGTGFTEVSLEQLHKQLKKLQRKDSPLAKKLS 492

Query: 296 GPSRWSSERSGEWEPVRPELVVEVRFDHVSNRRFRHGTKLMRWRPDKDPRQCTYQQIMPS 355
                S  R  +W  V P+LV E  F   +          +  R DK  +    +   P+
Sbjct: 493 A----SQARGVQW--VAPQLVCEAEFAQWTREGIVRQAAFVGLRSDKPAKDVVREDAQPA 546